MAR 06, 2017 7:57 PM PST

Mathematical Model may Help Understanding of Health and Disease

WRITTEN BY: Carmen Leitch

Mathematical modeling has been successfully used in myriad applications, from predicting the weather to understanding behavior. Scientists have now proposed a mathematical model for human biology. From the genetic blueprint, proteins give rise to cellular and physiological machinery that compose tissues and organ systems, all working together in a complex synchronicity. A deep understanding of the human body is only possible when the details are placed within a larger framework. This model aims to capture such an overview, rather than focusing on specific, small details. Reporting in the Proceedings of the National Academy of Sciences, two mathematicians at the University of Michigan Medical School and University of California, Berkeley present a way to employ math as a tool to reveal how genetic material and the relationships of cells ultimately produce the function of a various tissue types.

Using advanced mathematics, researchers hope to create models of biological systems that can inform our understanding of normal development and disease. / Credit: University of Michigan

The scientists behind the project, Indika Rajapakse, an Assistant Professor of Computational Medicine at UM Medical School and Stephen Smale, a Berkeley Professor Emeritus, have been developing this tool over years. Their goal is to use a mathematical model to simplify physiology, providing insight into the dynamics between cells that allow living tissue to function over time. Their work could improve our understanding of diseases and dysfunction in biological systems as well.

"All the time, this process is happening in our bodies, as cells are dying and arising, and yet they keep the function of the tissue going," said Rajapakse. "We need to use beautiful mathematics and beautiful biology together to understand the beauty of a tissue."

The researchers have used the work of Alan Turing as inspiration. Considered the father of the computer, Turing was a British mathematician who invented the "Turing machine," a computer that deciphered encrypted Nazi messages, helping to win World War II. Turing was also interested in biology and in later life  started investigating the mathematics of morphogenesis, the development of an organism from an embryo to an adult.

"Our approach adapts Turing's technique, combining genome dynamics within the cell and the diffusion dynamics between cells," said Rajapakse, the leader of the UM 4D+ Genome Lab in the Department of Computational Medicine and Bioinformatics.

Smale, who won mathematics' Fields Medal in 1966 is still active in research even in retirement. Check out an interview with him in the following video. Smale is seen as a founder of modeling dynamical systems, which change over time and space. Rajapakse and Smale collaborated on research into the human genome. Cells are dynamic during the life of a human,using a relatively stable genome in different ways at different times. Previous work by this team has laid out the mathematics underpinning gene regulation.

"Neither Turing nor Steve Smale, when we began our work, knew about the genome," because their training has been in classical mathematicians, said Rajapakse. "But using mathematical techniques, we can study the natural dynamics of the genomes of groups of cells as they develop and interact with one another, forming networks."

The collaboration with Smale has enabled Rajapakse to obtain Defense Advanced Research Projects Agency funding to keep investigating how functionality arises, as well as how disruptions affect these systems. For example, cancer is seen as a disease arising from disorders in cell proliferation or development.

Rajapakse wants to integrate experimental data from his lab to inform his research on cancer and cell reprogramming. "The cell cycle is the most precise, beautiful thing," said Rajapakse. "When we have a clear mathematical understanding, we can create computer models and further explore the beauty of us, explained through mathematics."

Sources: AAAS/Eurekalert! via University of Michigan Medical School, PNAS

About the Author
  • Experienced research scientist and technical expert with authorships on over 30 peer-reviewed publications, traveler to over 70 countries, published photographer and internationally-exhibited painter, volunteer trained in disaster-response, CPR and DV counseling.
You May Also Like
DEC 07, 2021
Cell & Molecular Biology
How Some Tissues 'Breathe' When There's No Oxygen
DEC 07, 2021
How Some Tissues 'Breathe' When There's No Oxygen
Whitehead Institute researchers have solved a long-standing mystery about the cell's powerhouse, and the production of A ...
DEC 08, 2021
Genetics & Genomics
Expanding the Gene-Editing Toolbox
DEC 08, 2021
Expanding the Gene-Editing Toolbox
The CRISPR-Cas9 gene-editing technology sparked a veritable revolution in the biomedical sciences, taking genetic engine ...
DEC 12, 2021
Cell & Molecular Biology
An Intricate Wiring Diagram of the Cells in a Mouse Brain
DEC 12, 2021
An Intricate Wiring Diagram of the Cells in a Mouse Brain
A detailed map of thousands of neurons in the mouse brain was created by a team of researchers, who worked on the projec ...
DEC 18, 2021
Cell & Molecular Biology
How the HTLV-1 Virus Can Turn Immune Cells Cancerous
DEC 18, 2021
How the HTLV-1 Virus Can Turn Immune Cells Cancerous
In some cases, viruses have been linked to cancer. For example, HPV, which is now preventable with a vaccine, can lead t ...
DEC 19, 2021
Cancer
An Antibody to Clear the Way for Drug Delivery to Tumors
DEC 19, 2021
An Antibody to Clear the Way for Drug Delivery to Tumors
Tumors require blood vessels to obtain nutrients and growth factors needed for their expansion.  Many tumors effici ...
JAN 06, 2022
Immunology
Gene for Smelling Helps Cancer Cells Move to the Brain
JAN 06, 2022
Gene for Smelling Helps Cancer Cells Move to the Brain
From tasting a delicious meal to picking up pheromones, olfaction (or the sense of smell) involves a network of complex ...
Loading Comments...