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    Transcriptomics

    Transcriptomics: is the study of the transcriptome-the complete set of RNA transcripts that are produced by the genome, under specific circumstances or in a specific cell-using high-throughput methods, such as microarray analysis.

    Webinars

    • MAR 10, 2022 | 7:30 AM
      Spatial Transcriptomic Profiling of Spiny Projection Neurons in the Mouse Striatum
      Spatial Transcriptomic Profiling of Spiny Projection Neurons in...
      NanoString has started an ambitious project called the "Spatial Organ Atlas." The goal of this initiative is to map the architecture of tissues with spatially resolved whole transc...
      Speaker: Alison VanSchoiack, PhD
      Presented at: Neuroscience Virtual Event Series 2022
      Sponsored By: NanoString Technologies
      3
      MAR 02, 2022 | 9:00 AM
      Double transcriptomic reads in single cell RNA-seq using molecular depletion
      Double transcriptomic reads in single cell RNA-seq using molecular...
      Date: March 02, 2022 Time: 9:00am (PST), 12:00pm (EST) Single cell RNA-seq is known to only capture a small fraction of the transcriptome of each cell. Often, this is due to inherent limitat...
      Speaker: Jon Bezney
      Sponsored By: Jumpcode Genomics
      9
      FEB 23, 2022 | 1:30 PM
      Innovative Approaches to Biomarker Discovery in the Drug Development Process
      Innovative Approaches to Biomarker Discovery in the Drug Development...
      High-throughput sequencing technology such as RNASeq and whole genome sequencing has enabled deep characterization of health and disease states. Biomarker discovery by these means has only h...
      Speaker: Esperanza Anguiano, PhD, MS-MBA
      Presented at: Drug Discovery & Development Virtual Event Series 2022
      Sponsored By: NanoString Technologies
      2
      OCT 27, 2021 | 10:00 AM
      A CRISPR powered NGS library prep to improve viral, bacterial and host transcript detection in shotgun metagenomic sequencing
      A CRISPR powered NGS library prep to improve viral, bacterial...
      Date: October 27, 2021 Time: 10:00am (PDT), 1:00pm (EDT) The COVID-19 pandemic has brought global awareness to the dangers of emerging pathogens to human health and welfare. Common molecular...
      Speaker: Jon Armstrong, MSc
      Sponsored By: Jumpcode Genomics
      6 2
      OCT 26, 2021 | 11:00 AM
      Constructing a Spatially Resolved Single-cell Atlas of the Mouse Retina with the MERSCOPE Platform
      Constructing a Spatially Resolved Single-cell Atlas of the Mouse...
      Date: October 26, 2021 Time: 11:00am (PDT), 1:00pm (EDT) The retina is the light-sensing part of the visual system and is composed of six neuron types and several non-neuronal cell types, wi...
      Speaker: Rui Chen, B.S., Ph.D.
      Sponsored By: Vizgen
      5
      OCT 21, 2021 | 7:00 AM
      Including Spatial Proteomics in your research - why and how
      Including Spatial Proteomics in your research - why and how
      Date: October 21, 2021 Time: 7:00am (PDT), 10:00am (EDT) To simultaneously visualize multiple markers within the same sample enables a more detailed view of cellular phenotypes and how they...
      Speaker: Charlotte
      Sponsored By: Lunaphore
      1
      OCT 13, 2021 | 10:30 AM
      Spatial Transcriptomic Profiling of Severe COVID-19 Patients
      Spatial Transcriptomic Profiling of Severe COVID-19 Patients
      Severe SARS-CoV-2 infection often leads to development of acute respiratory distress syndrome (ARDS), with profound pulmonary patho-histological changes post-mortem. In this study, we utiliz...
      Speaker: Camilla Margaroli, PhD
      Presented at: Coronavirus Series
      Sponsored By: NanoString Technologies
      2
      SEP 29, 2021 | 9:00 AM
      Panel Presentation: Harnessing Novel CRISPR Systems for Transcriptome Engineering
      Panel Presentation: Harnessing Novel CRISPR Systems for Transcriptome...
      RNA plays important and diverse roles in biology, but molecular tools to manipulate and measure RNA are limited. We demonstrate that RNA-targeting CRISPR effector Cas13 and novel RNA targeti...
      Speaker: Omar Abudayyeh, PhD , Jonathan Gootenberg, PhD
      Presented at: CRISPR Virtual Event Series 2021
      1
      AUG 25, 2021 | 1:30 PM
      Spatial Context Matters: Molecular Cartographyâ„¢ to Study Gene Expression Changes in the Brain
      Spatial Context Matters: Molecular Cartographyâ„¢ to Study Gene...
      Technological advances such as single-cell RNA sequencing accelerated our understanding of cellular diversity in tissues. However, the ability to elucidate this cellular heterogeneity while...
      Speaker: Jeroen Aerts, PhD
      Presented at: Neuroscience Virtual Event Series 2021
      Sponsored By: Resolve Biosciences
      1
      AUG 25, 2021 | 1:30 PM
      Spatial Transcriptomics of Alzheimer's Disease Mouse Models with and Without Trem2R47H Mutation.
      Spatial Transcriptomics of Alzheimer's Disease Mouse Models with...
      In this preliminary experiment, we used spatial transcriptomics to assess the gene expression profiles of microglia or astrocytes in relation to their distance from plaques. We compared 18-m...
      Speaker: Frances Edwards, PhD
      Presented at: Neuroscience Virtual Event Series 2021
      Sponsored By: NanoString Technologies
      1
      AUG 25, 2021 | 12:00 AM
      Can Multiscale Computer Modeling Save the Human Genome Project?: Climbing the Omes for Schizophrenia
      Can Multiscale Computer Modeling Save the Human Genome Project?:...
      Multiscale modeling has arisen as a focus of computational systems biology, with the realization that genome, proteome, connectome, etceteromes, will only become comprehensible once placed i...
      Speaker: William Lytton, MD
      Presented at: Neuroscience Virtual Event Series 2021
      3
      JUL 15, 2021 | 9:00 AM
      Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
      Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
      Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
      Speaker: Brian Hilbush, Ph.D.
      Sponsored By: Veranome Biosystems
      9
      JUN 24, 2021 | 8:00 AM
      Insights to Heart Development and Disease using Single-Cell Analysis and In Vitro Modeling of Pluripotent Stem Cells
      Insights to Heart Development and Disease using Single-Cell Analysis...
      Date: June 24, 2021 Time: 8:00am (PDT), 11:00am (EDT) Cardiovascular disease is a leading health problem, affecting almost 30% of individuals in the developed world, and comprises a wide ran...
      Speaker: Dr. Peter Andersen
      Sponsored By: Sony Biotechnology
      3
      APR 22, 2021 | 10:30 AM
      Extraction-free sensitive detection of viral RNA using direct RT-PCR chemistry
      Extraction-free sensitive detection of viral RNA using direct...
      Nucleic acid amplification tests (NAAT) are a reliable, sensitive, and accurate diagnostic approach used in viral detection. The approach involves the isolation of nucleic acids from a sampl...
      Speaker: Donald Green
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: Cytiva
      4 1
      APR 22, 2021 | 5:00 PM
      Researchers share their Spatial Discoveries in Neurology Research
      Researchers share their Spatial Discoveries in Neurology Research
      Date: April 22, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) System transcriptomics of the schizophrenia brain - Phillip Khaitovich Schizophrenia tops the psychiatric disorder l...
      Speaker: Philipp Khaitovich , Joan Liu
      Sponsored By: NanoString Technologies, Illumina
      5
      APR 21, 2021 | 5:00 PM
      Immunology Researchers share their Spatial Discoveries in SARS-CoV-2 host response and in multiple sclerosis
      Immunology Researchers share their Spatial Discoveries in SARS-CoV-2...
      Date: April 21, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) Spatial Answers Trilogy - Spatial Answers in Immunology Immunology Researchers share their Spatial Discoveries in SARS-C...
      Speaker: Doug Brown, PhD , Susanne Krasemann, MD, PhD , Michelle Naughton, PhD
      Sponsored By: NanoString Technologies, Illumina
      5
      APR 20, 2021 | 4:30 PM
      C.E. CREDITS
      High-throughput clinical and environmental viral extraction and sequencing
      High-throughput clinical and environmental viral extraction and...
      COVID-19 is a severe disease that has caused >1 million deaths in under one year. As this disease is novel, the molecular and cellular underpinnings of the progressive tissue injury are p...
      Speaker: Christopher Mason, Ph.D
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: Tecan
      2
      APR 20, 2021 | 1:30 PM
      Panel Presentation: Attain successful single-cell sequencing results with the latest cell and nuclei isolation workflows
      Panel Presentation: Attain successful single-cell sequencing results...
      Revolutionary sequencing technologies are enabling whole transcriptome profiling of tens to hundreds of thousands of single cells in parallel, in a single experiment. This has led to an expl...
      Speaker: Carina Emery , Alina Steinbach
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: Miltenyi Biotec
      2
      APR 20, 2021 | 5:00 PM
      Researchers share their Spatial Discoveries in Cancer Research
      Researchers share their Spatial Discoveries in Cancer Research
      Date: April 20, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) Spatial Answers on Oncology - Professor Joan Seoane Prof. Joan Seoane, Group Leader and Director of the Translational Re...
      Speaker: Noel De Miranda , Vasilis Stavrinides, MD
      Sponsored By: NanoString Technologies, Illumina
      4
      APR 20, 2021 | 12:00 AM
      Cell type-specific vulnerability to traumatic brain injury
      Cell type-specific vulnerability to traumatic brain injury
      Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
      Speaker: Araks Martirosyan, Ph.D.
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Studying Promoter and Isoform Diversity with Long-Read Transcriptome Sequencing
      Studying Promoter and Isoform Diversity with Long-Read Transcriptome...
      Learning Objectives: 1. Learn about alternative promoters and their role in cancer 2. Learn how long read RNA-Seq helps to study the transcriptome...
      Speaker: Jonathan Göke
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
      Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
      Speaker: Fairlie Reese, PhD Student
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Practical Considerations and Best Practices for Single Cell and Spatial Transcriptomics
      Practical Considerations and Best Practices for Single Cell and...
      Learning Obejctives: 1. Understand the key requirements for sample preparation in a single cell and/or spatial transcriptomics experiment 2. Learn the synergies between a combined single cel...
      Speaker: Neil Winegarden, MSc
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics
      Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics
      Biological systems are comprised of numerous cell types, intricately organized to form functional tissues and organs. Cell atlas initiatives with single-cell RNA sequencing have begun to cha...
      Speaker: Jiang He
      Presented at: Genetics Week Virtual Event Series 2021
      1
    MAR 10, 2022 | 7:30 AM
    Spatial Transcriptomic Profiling of Spiny Projection Neurons in the Mouse Striatum
    Spatial Transcriptomic Profiling of Spiny Projection Neurons in...
    NanoString has started an ambitious project called the "Spatial Organ Atlas." The goal of this initiative is to map the architecture of tissues with spatially resolved whole transc...
    Speaker: Alison VanSchoiack, PhD
    Presented at: Neuroscience Virtual Event Series 2022
    Sponsored By: NanoString Technologies
    3
    MAR 02, 2022 | 9:00 AM
    Double transcriptomic reads in single cell RNA-seq using molecular depletion
    Double transcriptomic reads in single cell RNA-seq using molecular...
    Date: March 02, 2022 Time: 9:00am (PST), 12:00pm (EST) Single cell RNA-seq is known to only capture a small fraction of the transcriptome of each cell. Often, this is due to inherent limitat...
    Speaker: Jon Bezney
    Sponsored By: Jumpcode Genomics
    9
    FEB 23, 2022 | 1:30 PM
    Innovative Approaches to Biomarker Discovery in the Drug Development Process
    Innovative Approaches to Biomarker Discovery in the Drug Development...
    High-throughput sequencing technology such as RNASeq and whole genome sequencing has enabled deep characterization of health and disease states. Biomarker discovery by these means has only h...
    Speaker: Esperanza Anguiano, PhD, MS-MBA
    Presented at: Drug Discovery & Development Virtual Event Series 2022
    Sponsored By: NanoString Technologies
    2
    OCT 27, 2021 | 10:00 AM
    A CRISPR powered NGS library prep to improve viral, bacterial and host transcript detection in shotgun metagenomic sequencing
    A CRISPR powered NGS library prep to improve viral, bacterial...
    Date: October 27, 2021 Time: 10:00am (PDT), 1:00pm (EDT) The COVID-19 pandemic has brought global awareness to the dangers of emerging pathogens to human health and welfare. Common molecular...
    Speaker: Jon Armstrong, MSc
    Sponsored By: Jumpcode Genomics
    6 2
    OCT 26, 2021 | 11:00 AM
    Constructing a Spatially Resolved Single-cell Atlas of the Mouse Retina with the MERSCOPE Platform
    Constructing a Spatially Resolved Single-cell Atlas of the Mouse...
    Date: October 26, 2021 Time: 11:00am (PDT), 1:00pm (EDT) The retina is the light-sensing part of the visual system and is composed of six neuron types and several non-neuronal cell types, wi...
    Speaker: Rui Chen, B.S., Ph.D.
    Sponsored By: Vizgen
    5
     
     
  • OCT 21, 2021 | 7:00 AM
    Including Spatial Proteomics in your research - why and how
    Including Spatial Proteomics in your research - why and how
    Date: October 21, 2021 Time: 7:00am (PDT), 10:00am (EDT) To simultaneously visualize multiple markers within the same sample enables a more detailed view of cellular phenotypes and how they...
    Speaker: Charlotte
    Sponsored By: Lunaphore
    1
    OCT 13, 2021 | 10:30 AM
    Spatial Transcriptomic Profiling of Severe COVID-19 Patients
    Spatial Transcriptomic Profiling of Severe COVID-19 Patients
    Severe SARS-CoV-2 infection often leads to development of acute respiratory distress syndrome (ARDS), with profound pulmonary patho-histological changes post-mortem. In this study, we utiliz...
    Speaker: Camilla Margaroli, PhD
    Presented at: Coronavirus Series
    Sponsored By: NanoString Technologies
    2
    SEP 29, 2021 | 9:00 AM
    Panel Presentation: Harnessing Novel CRISPR Systems for Transcriptome Engineering
    Panel Presentation: Harnessing Novel CRISPR Systems for Transcriptome...
    RNA plays important and diverse roles in biology, but molecular tools to manipulate and measure RNA are limited. We demonstrate that RNA-targeting CRISPR effector Cas13 and novel RNA targeti...
    Speaker: Omar Abudayyeh, PhD , Jonathan Gootenberg, PhD
    Presented at: CRISPR Virtual Event Series 2021
    1
    AUG 25, 2021 | 1:30 PM
    Spatial Context Matters: Molecular Cartographyâ„¢ to Study Gene Expression Changes in the Brain
    Spatial Context Matters: Molecular Cartographyâ„¢ to Study Gene...
    Technological advances such as single-cell RNA sequencing accelerated our understanding of cellular diversity in tissues. However, the ability to elucidate this cellular heterogeneity while...
    Speaker: Jeroen Aerts, PhD
    Presented at: Neuroscience Virtual Event Series 2021
    Sponsored By: Resolve Biosciences
    1
    AUG 25, 2021 | 1:30 PM
    Spatial Transcriptomics of Alzheimer's Disease Mouse Models with and Without Trem2R47H Mutation.
    Spatial Transcriptomics of Alzheimer's Disease Mouse Models with...
    In this preliminary experiment, we used spatial transcriptomics to assess the gene expression profiles of microglia or astrocytes in relation to their distance from plaques. We compared 18-m...
    Speaker: Frances Edwards, PhD
    Presented at: Neuroscience Virtual Event Series 2021
    Sponsored By: NanoString Technologies
    1
     
     
  • AUG 25, 2021 | 12:00 AM
    Can Multiscale Computer Modeling Save the Human Genome Project?: Climbing the Omes for Schizophrenia
    Can Multiscale Computer Modeling Save the Human Genome Project?:...
    Multiscale modeling has arisen as a focus of computational systems biology, with the realization that genome, proteome, connectome, etceteromes, will only become comprehensible once placed i...
    Speaker: William Lytton, MD
    Presented at: Neuroscience Virtual Event Series 2021
    3
    JUL 15, 2021 | 9:00 AM
    Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
    Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
    Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
    Speaker: Brian Hilbush, Ph.D.
    Sponsored By: Veranome Biosystems
    9
    JUN 24, 2021 | 8:00 AM
    Insights to Heart Development and Disease using Single-Cell Analysis and In Vitro Modeling of Pluripotent Stem Cells
    Insights to Heart Development and Disease using Single-Cell Analysis...
    Date: June 24, 2021 Time: 8:00am (PDT), 11:00am (EDT) Cardiovascular disease is a leading health problem, affecting almost 30% of individuals in the developed world, and comprises a wide ran...
    Speaker: Dr. Peter Andersen
    Sponsored By: Sony Biotechnology
    3
    APR 22, 2021 | 10:30 AM
    Extraction-free sensitive detection of viral RNA using direct RT-PCR chemistry
    Extraction-free sensitive detection of viral RNA using direct...
    Nucleic acid amplification tests (NAAT) are a reliable, sensitive, and accurate diagnostic approach used in viral detection. The approach involves the isolation of nucleic acids from a sampl...
    Speaker: Donald Green
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: Cytiva
    4 1
    APR 22, 2021 | 5:00 PM
    Researchers share their Spatial Discoveries in Neurology Research
    Researchers share their Spatial Discoveries in Neurology Research
    Date: April 22, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) System transcriptomics of the schizophrenia brain - Phillip Khaitovich Schizophrenia tops the psychiatric disorder l...
    Speaker: Philipp Khaitovich , Joan Liu
    Sponsored By: NanoString Technologies, Illumina
    5
     
     
  • APR 21, 2021 | 5:00 PM
    Immunology Researchers share their Spatial Discoveries in SARS-CoV-2 host response and in multiple sclerosis
    Immunology Researchers share their Spatial Discoveries in SARS-CoV-2...
    Date: April 21, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) Spatial Answers Trilogy - Spatial Answers in Immunology Immunology Researchers share their Spatial Discoveries in SARS-C...
    Speaker: Doug Brown, PhD , Susanne Krasemann, MD, PhD , Michelle Naughton, PhD
    Sponsored By: NanoString Technologies, Illumina
    5
    APR 20, 2021 | 4:30 PM
    C.E. CREDITS
    High-throughput clinical and environmental viral extraction and sequencing
    High-throughput clinical and environmental viral extraction and...
    COVID-19 is a severe disease that has caused >1 million deaths in under one year. As this disease is novel, the molecular and cellular underpinnings of the progressive tissue injury are p...
    Speaker: Christopher Mason, Ph.D
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: Tecan
    2
    APR 20, 2021 | 1:30 PM
    Panel Presentation: Attain successful single-cell sequencing results with the latest cell and nuclei isolation workflows
    Panel Presentation: Attain successful single-cell sequencing results...
    Revolutionary sequencing technologies are enabling whole transcriptome profiling of tens to hundreds of thousands of single cells in parallel, in a single experiment. This has led to an expl...
    Speaker: Carina Emery , Alina Steinbach
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: Miltenyi Biotec
    2
    APR 20, 2021 | 5:00 PM
    Researchers share their Spatial Discoveries in Cancer Research
    Researchers share their Spatial Discoveries in Cancer Research
    Date: April 20, 2021 Time: 8:00am (PDT), 11:00am (EDT), 5:00pm (CEST) Spatial Answers on Oncology - Professor Joan Seoane Prof. Joan Seoane, Group Leader and Director of the Translational Re...
    Speaker: Noel De Miranda , Vasilis Stavrinides, MD
    Sponsored By: NanoString Technologies, Illumina
    4
    APR 20, 2021 | 12:00 AM
    Cell type-specific vulnerability to traumatic brain injury
    Cell type-specific vulnerability to traumatic brain injury
    Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
    Speaker: Araks Martirosyan, Ph.D.
    Presented at: Genetics Week Virtual Event Series 2021
    1
     
     
  • APR 20, 2021 | 12:00 AM
    Studying Promoter and Isoform Diversity with Long-Read Transcriptome Sequencing
    Studying Promoter and Isoform Diversity with Long-Read Transcriptome...
    Learning Objectives: 1. Learn about alternative promoters and their role in cancer 2. Learn how long read RNA-Seq helps to study the transcriptome...
    Speaker: Jonathan Göke
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
    Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
    Speaker: Fairlie Reese, PhD Student
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Practical Considerations and Best Practices for Single Cell and Spatial Transcriptomics
    Practical Considerations and Best Practices for Single Cell and...
    Learning Obejctives: 1. Understand the key requirements for sample preparation in a single cell and/or spatial transcriptomics experiment 2. Learn the synergies between a combined single cel...
    Speaker: Neil Winegarden, MSc
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics
    Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics
    Biological systems are comprised of numerous cell types, intricately organized to form functional tissues and organs. Cell atlas initiatives with single-cell RNA sequencing have begun to cha...
    Speaker: Jiang He
    Presented at: Genetics Week Virtual Event Series 2021
    1
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