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    Microbiome and diseases

    The microbiome describes the microbes (such as bacteria, fungi, viruses) that live in and on our bodies. The distribution and presence of microbes can have a significant impact on health and disease. Further, alterations in the microbiome can impact how a patient will respond to treatments prescribed for diseases.

    Webinars

    • SEP 09, 2020 | 12:00 AM
      Lung immune cells as drivers of influenza outcomes
      Lung immune cells as drivers of influenza outcomes
      Influenza severity is determined by the interplay between the virus and the host response. Previously, we identified a three-pronged lung gene expression signature that predicted severe infl...
      Speaker: Juliet Morrison, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Applications of Machine Learning to Predict Clinical Provenance of Haemophilus influenzae
      Applications of Machine Learning to Predict Clinical Provenance...
      Background: Haemophilus influenzae is the causative agent of multiple human disease conditions among multiple sites in the human body. Underlying genetic mechanisms are elusive, particularly...
      Speaker: Joshua Earl, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Development of Respiratory Syncytial Virus and Universal Influenza Virus Vaccines Conformationally Stabilized by Targeted Dityrosine Crosslinking
      Development of Respiratory Syncytial Virus and Universal Influenza...
      While viral fusion proteins are highly desirable for subunit vaccine generation, their inherent metastable nature complicates implementation and development. We have harnessed the structural...
      Speaker: Mark A. Yondola, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Deep Learning by Analogy: Applying Text and Image Processing Techniques to Sequence Analysis
      Deep Learning by Analogy: Applying Text and Image Processing Techniques...
      Over the past five years there has been an explosion of research the deep learning field. Companies like Google, Facebook, and OpenAI have created neural networks that are significantly more...
      Speaker: Will Dampier, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Recombination, lineage-specific mutations and the emergence of SARS-CoV-2
      Recombination, lineage-specific mutations and the emergence of...
      The recent outbreak of SARS-CoV-2 underscores the need for understanding the evolutionary processes that drive the emergence and adaptation of zoonotic viruses in humans. Here, we show that...
      Speaker: Ioan Filip, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Nanoparticle-based next-generation influenza vaccines
      Nanoparticle-based next-generation influenza vaccines
      Most currently used conventional influenza vaccines are based on 1940s technology. Advances in immunogen design and vaccine delivery emerging over the last decade open novel opportunities fo...
      Speaker: Masaru Kanekiyo, DVM, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Deep mutational scanning of SARS-CoV-2 receptor binding domain reveals constraints on folding and ACE2 binding
      Deep mutational scanning of SARS-CoV-2 receptor binding domain...
      The receptor binding domain (RBD) of the SARS-CoV-2 spike glycoprotein mediates viral attachment to ACE2 receptor, and is a major determinant of host range and a dominant target of neutraliz...
      Speaker: Tyler Starr, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      4
      SEP 08, 2020 | 12:00 PM
      Keynote Presentation: Structure-based Vaccine Design for COVID-19 and other Respiratory Viruses
      Keynote Presentation: Structure-based Vaccine Design for COVID-19...
      While the frequency of pandemic threats seems to be increasing, we fortunately have new tools and technologies to make vaccines with more precision and speed and that support a more proactiv...
      Speaker: Barney S. Graham, MD, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 10:00 AM
      Keynote Presentation: Single-cell virus sequencing of influenza infections that trigger innate immunity
      Keynote Presentation: Single-cell virus sequencing of influenza...
      Influenza infections are initiated by just a handful of virions infecting a handful of cells, so it is important to understand what happens in single infected cells. I will describe work tha...
      Speaker: Jesse D. Bloom, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      4
      SEP 08, 2020 | 9:00 AM
      Keynote Presentation: A Universal Influenza Virus Vaccine
      Keynote Presentation: A Universal Influenza Virus Vaccine
      Seasonal and pandemic influenza virus infections can cause significant disease worldwide. Current vaccines only provide limited, short-lived protection, and antigenic drift/shift in the hema...
      Speaker: Peter Palese, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      3
      SEP 08, 2020 | 6:00 AM
      Digital PCR using QIAGEN's QIacuity system: an introduction
      Digital PCR using QIAGEN's QIacuity system: an introduction
      This webinar covers various fundamental aspects of performing a successful digital PCR (dPCR) assay on the QIAcuity instruments. An essential parameter to consider in designing a dPCR assay...
      Speaker: Andreas Missel, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      Sponsored By: QIAGEN
      2
      JUL 23, 2020 | 10:00 AM
      Understanding the potential impact of the gut microbiome on SARS-CoV-2 Research
      Understanding the potential impact of the gut microbiome on SARS-CoV-2...
      DATE: July 23, 2020 TIME: 10:00am PDT, 1:00pm EDT SARS-CoV-2 virus has impacted billions of lives globally and has spurred many scientists to address some of the biggest questions regarding...
      Speaker: Heesun Shin
      Sponsored By: Thermo Fisher Scientific
      44 8
      JUL 22, 2020 | 10:00 AM
      Molecular Diagnostic Solutions in a Pandemic: Planning for the 2020/2021 Flu Season with the Implementation of the ePlex® Respiratory Pathogen Panel 2
      Molecular Diagnostic Solutions in a Pandemic: Planning for the...
      DATE: July 23, 2020 TIME: 10:00 am PDT The SARS-CoV-2 pandemic has taken a toll on many sectors of the medical community. As the pandemic took a grip on the laboratory, the need for diagnost...
      Speaker: Heba Mostafa, MD, PhD, D(ABMM)
      Sponsored By: GenMark Dx
      27 13
      JUL 01, 2020 | 12:15 PM
      Ion Torrent NGS-based simple and intuitive solutions for microbiome research
      Ion Torrent NGS-based simple and intuitive solutions for microbiome...
      Here I review the applications of Ion Torrent NGS technology in the field of microbiome research and some recent publications about it. With Ion Torrent 16S rRNA next generation sequencing,...
      Speaker: Keun-Joon Park, PhD
      Presented at: APJ Virtual Genetic Solutions Tour 2020
      2
      JUN 17, 2020 | 4:30 PM
      Patterns of Intrahost and Interhost variation in SARS-CoV-2
      Patterns of Intrahost and Interhost variation in SARS-CoV-2
      The fast spread of SARS-Cov-2 sparked much interest in understanding the underlying genomics of this 30,000bp Coronavirus. Thus far, thousands of genome assemblies are available, yet they fe...
      Speaker: Todd Treangen, PhD
      Presented at: Coronavirus Series
      1
      MAY 06, 2020 | 12:00 AM
      Deciphering the Necrobiome and Postmortem Microbiomes for Use in Forensics
      Deciphering the Necrobiome and Postmortem Microbiomes for Use...
      The necrobiome is the community of organisms that use or are affected by decomposing organic matter. Decomposing organic matter comes in the form of dead plant matter (biomass) or that of de...
      Speaker: M. Eric Benbow, PhD, AAFS-F
      Presented at: Forensic Sciences Virtual Event Series 2020
      1
      APR 29, 2020 | 6:00 AM
      Parsing Complex Disorders of the Gut-Immune-Brain Axis Into Clinically Meaningful Subsets: Immune Signatures as a Lens for Discovery
      Parsing Complex Disorders of the Gut-Immune-Brain Axis Into Clinically...
      ...
      Speaker: Mady Hornig, MA, MD
      Presented at: xMAP® Connect Virtual Conference (On-Demand)
      2
      APR 23, 2020 | 9:00 AM
      Keynote Presentation: Individualized Health
      Keynote Presentation: Individualized Health
      Learning Objectives: 1. What is wrong with healthcare today 2. What kinds of omics and wearables data can be used to best predict disease risk and manage health...
      Speaker: Michael Snyder, PhD
      Presented at: Genetics Week Virtual Event Series 2020
      1
      APR 22, 2020 | 12:00 AM
      Precision Infectious Disease Diagnostics Using Next-Generation Sequencing and AI
      Precision Infectious Disease Diagnostics Using Next-Generation...
      As the spread of infectious diseases, current pandemic, and growing antimicrobial resistance (AMR) continues globally, next-generation sequencing (NGS) and specifically metagenomics became a...
      Speaker: Dorottya Nagy-Szakal, MD PhD
      Presented at: Genetics Week Virtual Event Series 2020
      2
      NOV 06, 2019 | 1:30 PM
      Impact of the cobas Liat® Flu Assay on Clinical Decision Making in the Emergency Department Setting (Clade Study Group)
      Impact of the cobas Liat® Flu Assay on Clinical Decision Making...
      Respiratory viral infections remain a leading cause of medical visits and can contribute significantly to morbidity and mortality. Influenza, together with pneumonia, is the leading infectiou...
      Speaker: Glen Hansen, PhD
      Presented at: Influenza Virtual Event Series 2019
      3 1
      NOV 06, 2019 | 1:30 PM
      Challenges towards a Universal Influenza Virus Vaccine
      Challenges towards a Universal Influenza Virus Vaccine
      Despite FDA-approved vaccines and antivirals, seasonal and pandemic influenza remains a serious threat associated with substantial morbidity and mortality. The present modalities and vaccine...
      Speaker: Peter Palese, PhD
      Presented at: Influenza Virtual Event Series 2019
      4 1
      NOV 06, 2019 | 12:00 PM
      A dose of the flu: influenza's variable virus particles
      A dose of the flu: influenza's variable virus particles
      Influenza viruses are transmitted by membrane-bound virus particles, or virions. Unlike some viruses, which produce near-identical virions from a well-defined set of viral components, influen...
      Speaker: Edward Hutchinson, PhD
      Presented at: Influenza Virtual Event Series 2019
      4 2
      NOV 06, 2019 | 10:30 AM
      Drug discovery and pharmacology of antivirals targeting drug-resistant influenza viruses
      Drug discovery and pharmacology of antivirals targeting drug-resistant...
      The efficacy of current influenza antiviral drugs is compromised by emerging drug resistance. To address this unmet medical need, we have made progress in developing novel influenza antiviral...
      Speaker: Jun Wang, PhD
      Presented at: Influenza Virtual Event Series 2019
      6
      NOV 06, 2019 | 9:00 AM
      The 2019 Flu Season: Protecting your health and the health of your family
      The 2019 Flu Season: Protecting your health and the health of...
      To prepare for the 2019 flu season it is important to get immunized. In 2019 a tetravalent (four-virus) vaccine is available in a number of forms including an egg-free formulation that is for...
      Speaker: Lynn Goldman, MD, MPH
      Presented at: Influenza Virtual Event Series 2019
      3 1
    SEP 09, 2020 | 12:00 AM
    Lung immune cells as drivers of influenza outcomes
    Lung immune cells as drivers of influenza outcomes
    Influenza severity is determined by the interplay between the virus and the host response. Previously, we identified a three-pronged lung gene expression signature that predicted severe infl...
    Speaker: Juliet Morrison, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Applications of Machine Learning to Predict Clinical Provenance of Haemophilus influenzae
    Applications of Machine Learning to Predict Clinical Provenance...
    Background: Haemophilus influenzae is the causative agent of multiple human disease conditions among multiple sites in the human body. Underlying genetic mechanisms are elusive, particularly...
    Speaker: Joshua Earl, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Development of Respiratory Syncytial Virus and Universal Influenza Virus Vaccines Conformationally Stabilized by Targeted Dityrosine Crosslinking
    Development of Respiratory Syncytial Virus and Universal Influenza...
    While viral fusion proteins are highly desirable for subunit vaccine generation, their inherent metastable nature complicates implementation and development. We have harnessed the structural...
    Speaker: Mark A. Yondola, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Deep Learning by Analogy: Applying Text and Image Processing Techniques to Sequence Analysis
    Deep Learning by Analogy: Applying Text and Image Processing Techniques...
    Over the past five years there has been an explosion of research the deep learning field. Companies like Google, Facebook, and OpenAI have created neural networks that are significantly more...
    Speaker: Will Dampier, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Recombination, lineage-specific mutations and the emergence of SARS-CoV-2
    Recombination, lineage-specific mutations and the emergence of...
    The recent outbreak of SARS-CoV-2 underscores the need for understanding the evolutionary processes that drive the emergence and adaptation of zoonotic viruses in humans. Here, we show that...
    Speaker: Ioan Filip, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
     
     
  • SEP 08, 2020 | 11:00 PM
    Nanoparticle-based next-generation influenza vaccines
    Nanoparticle-based next-generation influenza vaccines
    Most currently used conventional influenza vaccines are based on 1940s technology. Advances in immunogen design and vaccine delivery emerging over the last decade open novel opportunities fo...
    Speaker: Masaru Kanekiyo, DVM, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Deep mutational scanning of SARS-CoV-2 receptor binding domain reveals constraints on folding and ACE2 binding
    Deep mutational scanning of SARS-CoV-2 receptor binding domain...
    The receptor binding domain (RBD) of the SARS-CoV-2 spike glycoprotein mediates viral attachment to ACE2 receptor, and is a major determinant of host range and a dominant target of neutraliz...
    Speaker: Tyler Starr, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    4
    SEP 08, 2020 | 12:00 PM
    Keynote Presentation: Structure-based Vaccine Design for COVID-19 and other Respiratory Viruses
    Keynote Presentation: Structure-based Vaccine Design for COVID-19...
    While the frequency of pandemic threats seems to be increasing, we fortunately have new tools and technologies to make vaccines with more precision and speed and that support a more proactiv...
    Speaker: Barney S. Graham, MD, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 10:00 AM
    Keynote Presentation: Single-cell virus sequencing of influenza infections that trigger innate immunity
    Keynote Presentation: Single-cell virus sequencing of influenza...
    Influenza infections are initiated by just a handful of virions infecting a handful of cells, so it is important to understand what happens in single infected cells. I will describe work tha...
    Speaker: Jesse D. Bloom, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    4
    SEP 08, 2020 | 9:00 AM
    Keynote Presentation: A Universal Influenza Virus Vaccine
    Keynote Presentation: A Universal Influenza Virus Vaccine
    Seasonal and pandemic influenza virus infections can cause significant disease worldwide. Current vaccines only provide limited, short-lived protection, and antigenic drift/shift in the hema...
    Speaker: Peter Palese, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    3
     
     
  • SEP 08, 2020 | 6:00 AM
    Digital PCR using QIAGEN's QIacuity system: an introduction
    Digital PCR using QIAGEN's QIacuity system: an introduction
    This webinar covers various fundamental aspects of performing a successful digital PCR (dPCR) assay on the QIAcuity instruments. An essential parameter to consider in designing a dPCR assay...
    Speaker: Andreas Missel, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    Sponsored By: QIAGEN
    2
    JUL 23, 2020 | 10:00 AM
    Understanding the potential impact of the gut microbiome on SARS-CoV-2 Research
    Understanding the potential impact of the gut microbiome on SARS-CoV-2...
    DATE: July 23, 2020 TIME: 10:00am PDT, 1:00pm EDT SARS-CoV-2 virus has impacted billions of lives globally and has spurred many scientists to address some of the biggest questions regarding...
    Speaker: Heesun Shin
    Sponsored By: Thermo Fisher Scientific
    44 8
    JUL 22, 2020 | 10:00 AM
    Molecular Diagnostic Solutions in a Pandemic: Planning for the 2020/2021 Flu Season with the Implementation of the ePlex® Respiratory Pathogen Panel 2
    Molecular Diagnostic Solutions in a Pandemic: Planning for the...
    DATE: July 23, 2020 TIME: 10:00 am PDT The SARS-CoV-2 pandemic has taken a toll on many sectors of the medical community. As the pandemic took a grip on the laboratory, the need for diagnost...
    Speaker: Heba Mostafa, MD, PhD, D(ABMM)
    Sponsored By: GenMark Dx
    27 13
    JUL 01, 2020 | 12:15 PM
    Ion Torrent NGS-based simple and intuitive solutions for microbiome research
    Ion Torrent NGS-based simple and intuitive solutions for microbiome...
    Here I review the applications of Ion Torrent NGS technology in the field of microbiome research and some recent publications about it. With Ion Torrent 16S rRNA next generation sequencing,...
    Speaker: Keun-Joon Park, PhD
    Presented at: APJ Virtual Genetic Solutions Tour 2020
    2
    JUN 17, 2020 | 4:30 PM
    Patterns of Intrahost and Interhost variation in SARS-CoV-2
    Patterns of Intrahost and Interhost variation in SARS-CoV-2
    The fast spread of SARS-Cov-2 sparked much interest in understanding the underlying genomics of this 30,000bp Coronavirus. Thus far, thousands of genome assemblies are available, yet they fe...
    Speaker: Todd Treangen, PhD
    Presented at: Coronavirus Series
    1
     
     
  • MAY 06, 2020 | 12:00 AM
    Deciphering the Necrobiome and Postmortem Microbiomes for Use in Forensics
    Deciphering the Necrobiome and Postmortem Microbiomes for Use...
    The necrobiome is the community of organisms that use or are affected by decomposing organic matter. Decomposing organic matter comes in the form of dead plant matter (biomass) or that of de...
    Speaker: M. Eric Benbow, PhD, AAFS-F
    Presented at: Forensic Sciences Virtual Event Series 2020
    1
    APR 29, 2020 | 6:00 AM
    Parsing Complex Disorders of the Gut-Immune-Brain Axis Into Clinically Meaningful Subsets: Immune Signatures as a Lens for Discovery
    Parsing Complex Disorders of the Gut-Immune-Brain Axis Into Clinically...
    ...
    Speaker: Mady Hornig, MA, MD
    Presented at: xMAP® Connect Virtual Conference (On-Demand)
    2
    APR 23, 2020 | 9:00 AM
    Keynote Presentation: Individualized Health
    Keynote Presentation: Individualized Health
    Learning Objectives: 1. What is wrong with healthcare today 2. What kinds of omics and wearables data can be used to best predict disease risk and manage health...
    Speaker: Michael Snyder, PhD
    Presented at: Genetics Week Virtual Event Series 2020
    1
    APR 22, 2020 | 12:00 AM
    Precision Infectious Disease Diagnostics Using Next-Generation Sequencing and AI
    Precision Infectious Disease Diagnostics Using Next-Generation...
    As the spread of infectious diseases, current pandemic, and growing antimicrobial resistance (AMR) continues globally, next-generation sequencing (NGS) and specifically metagenomics became a...
    Speaker: Dorottya Nagy-Szakal, MD PhD
    Presented at: Genetics Week Virtual Event Series 2020
    2
    NOV 06, 2019 | 1:30 PM
    Impact of the cobas Liat® Flu Assay on Clinical Decision Making in the Emergency Department Setting (Clade Study Group)
    Impact of the cobas Liat® Flu Assay on Clinical Decision Making...
    Respiratory viral infections remain a leading cause of medical visits and can contribute significantly to morbidity and mortality. Influenza, together with pneumonia, is the leading infectiou...
    Speaker: Glen Hansen, PhD
    Presented at: Influenza Virtual Event Series 2019
    3 1
     
     
  • NOV 06, 2019 | 1:30 PM
    Challenges towards a Universal Influenza Virus Vaccine
    Challenges towards a Universal Influenza Virus Vaccine
    Despite FDA-approved vaccines and antivirals, seasonal and pandemic influenza remains a serious threat associated with substantial morbidity and mortality. The present modalities and vaccine...
    Speaker: Peter Palese, PhD
    Presented at: Influenza Virtual Event Series 2019
    4 1
    NOV 06, 2019 | 12:00 PM
    A dose of the flu: influenza's variable virus particles
    A dose of the flu: influenza's variable virus particles
    Influenza viruses are transmitted by membrane-bound virus particles, or virions. Unlike some viruses, which produce near-identical virions from a well-defined set of viral components, influen...
    Speaker: Edward Hutchinson, PhD
    Presented at: Influenza Virtual Event Series 2019
    4 2
    NOV 06, 2019 | 10:30 AM
    Drug discovery and pharmacology of antivirals targeting drug-resistant influenza viruses
    Drug discovery and pharmacology of antivirals targeting drug-resistant...
    The efficacy of current influenza antiviral drugs is compromised by emerging drug resistance. To address this unmet medical need, we have made progress in developing novel influenza antiviral...
    Speaker: Jun Wang, PhD
    Presented at: Influenza Virtual Event Series 2019
    6
    NOV 06, 2019 | 9:00 AM
    The 2019 Flu Season: Protecting your health and the health of your family
    The 2019 Flu Season: Protecting your health and the health of...
    To prepare for the 2019 flu season it is important to get immunized. In 2019 a tetravalent (four-virus) vaccine is available in a number of forms including an egg-free formulation that is for...
    Speaker: Lynn Goldman, MD, MPH
    Presented at: Influenza Virtual Event Series 2019
    3 1
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