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    Microbials

    Microbials (Bacteria) are unique living organisms that live their life as a single cell for its entirety. Bacillus is a specific type of (genus) of bacteria which grow aerobically (with oxygen) and to some extent anaerobically (without oxygen and forms spores. Microbial pre-treatment, also known as pre-acidification or multi-stage fermentation, is a simple kind of pre-treatment technology in which the first steps of anaerobic digestion (hydrolysis and acidogenesis) are separated from acetogenesis and methanogenesis.

    Webinars

    • SEP 08, 2021 | 12:00 AM
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
      The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
      Speaker: Ramy K. Aziz, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      1
      JUL 28, 2021 | 10:00 AM
      GMP Cleanroom Routine Environmental Monitoring & 21CFR part 11 Data Integrity
      GMP Cleanroom Routine Environmental Monitoring & 21CFR part 11...
      Date: July 28, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Routine Environmental Monitoring in GMP cleanrooms is a manual process and is usually complex, involving thousands of sample data points...
      Speaker: Tony Harrison
      Sponsored By: Beckman Coulter Life Sciences
      11
      JUN 29, 2021 | 10:00 AM
      Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2 Variants
      Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2...
      Date: June 29, 2021 Time: 10:00am (PDT), 1:00pm (EDT) SARS-CoV-2 continues to evolve and surveillance of variants is a necessity. Routine analysis of genetic sequence data allows the identif...
      Speaker: Donna Wolk, MHA, PhD, D(ABMM)
      Sponsored By: Diasorin
      16
      JUN 22, 2021 | 10:00 AM
      Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
      Can AI powered diagnostics revolutionize antimicrobial stewardship?...
      Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
      Speaker: Dr. Arne Materna
      Sponsored By: OpGen, Inc.
      7
      JUN 16, 2021 | 11:00 AM
      Implementation of a High-Throughput Wastewater SARS-CoV-2 Detection Method: Providing Actionable Data to your County or Campus
      Implementation of a High-Throughput Wastewater SARS-CoV-2 Detection...
      Date: June 16, 2021 Time: 11:00am (PDT), 2:00pm (EDT) Large-scale wastewater surveillance can be used to help communities monitor infection dynamics for SARS-CoV-2. Wide-spread implementatio...
      Speaker: Smruthi Karthikeyan, PhD
      Sponsored By: Ceres Nanosciences
      10
      MAY 27, 2021 | 11:00 AM
      Planning to Succeed - How and where standardization can improve your microbiome studies
      Planning to Succeed - How and where standardization can improve...
      Date: May 27, 2021 Time: 11:00am PDT, 2:00pm EDT Microbiome studies often suffer from issues that recent technological advances can solve easily. In this seminar, we will walk through planni...
      Speaker: Dr. Julia Cope, PhD.
      Sponsored By: Mawi DNA Technologies
      7 3
      MAY 27, 2021 | 10:00 AM
      Changes to USP <1788> Subvisible Particulate Matter
      Changes to USP <1788> Subvisible Particulate Matter
      DATE: May 27, 2021 TIME: 11:00am PDT A revised version of the USP chapter on Total Organic Carbon (TOC) USP<643> was published recently and will become official on 1 st May 2021. This...
      Speaker: Tony Harrison
      Sponsored By: Beckman Coulter Life Sciences
      5
      APR 28, 2021 | 11:00 AM
      Changes to USP <643> Total Organic Carbon for Pharmaceutical Grade Waters
      Changes to USP <643> Total Organic Carbon for Pharmaceutical Grade...
      DATE: April 28, 2021 TIME: 11:00am PDT A revised version of the USP chapter on Total Organic Carbon (TOC) USP<643> was published recently and will become official on 1 st May 2021. Thi...
      Speaker: Tony Harrison
      Sponsored By: Beckman Coulter Life Sciences
      5
      APR 20, 2021 | 12:00 AM
      C.E. CREDITS
      Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
      Low error rate long-reads enable the identification of long variant...
      Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
      Speaker: Derek Bickhart, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      SEP 30, 2020 | 1:30 PM
      Harnessing novel CRISPR systems for genome engineering
      Harnessing novel CRISPR systems for genome engineering
      RNA plays important and diverse roles in biology, but molecular tools to manipulate and measure RNA are limited. We demonstrate that RNA-targeting CRISPR effector Cas13 can be engineered for...
      Speaker: Omar Abudayyeh, PhD , Jonathan Gootenberg, PhD
      Presented at: CRISPR Virtual Event Series 2020
      4
      SEP 30, 2020 | 9:00 AM
      Massively parallel microbial genome engineering using the Onyxâ„¢ Platform
      Massively parallel microbial genome engineering using the Onyxâ„¢...
      While transformative, first-generation CRISPR technologies remain limited across multiple important dimensions including scalability, editing efficiency, types of modifications available, an...
      Speaker: Nandini Krishnamurthy, PhD
      Presented at: CRISPR Virtual Event Series 2020
      Sponsored By: Inscripta
      2
      SEP 10, 2020 | 2:00 PM
      Dynamic live yeast and bacterial cell imaging using CellASIC ONIX2 microfluidic platform
      Dynamic live yeast and bacterial cell imaging using CellASIC ONIX2...
      While live cell imaging offers advantages over traditional static imaging, this approach has been challenging for studying microbes due to the difficulty in tracking very small cells in a si...
      Speaker: Cindy Chen, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      Sponsored By: MilliporeSigma
      1
      SEP 10, 2020 | 12:00 PM
      Bacterial strain typing and genomics characterization of multi-drug resistance with QIAGEN CLC Genomics Workbench
      Bacterial strain typing and genomics characterization of multi-drug...
      In this webinar, we will present QIAGEN CLC Genomics Workbench and its utility for bacterial isolate identification, strain discrimination using core genome multi-locus typing (cgMLST) and d...
      Speaker: Jonathan Jacobs, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      Sponsored By: QIAGEN
      2
      SEP 10, 2020 | 11:00 AM
      Optimizing the extraction of human microbiome samples
      Optimizing the extraction of human microbiome samples
      Learning Objectives: 1. Understand the challenges of extracting DNA from human samples for microbiome analysis, and learn about the best technologies for accomplishing this 2. Learn about pr...
      Speaker: Dominic O'Neil, MS, MBA
      Presented at: Microbiology Week Virtual Event Series 2020
      Sponsored By: QIAGEN
      2
      SEP 10, 2020 | 10:00 AM
      Keynote Presentation: Squeezing out understanding from sequences: Genome to Phenome Connections in Viruses of Microbes
      Keynote Presentation: Squeezing out understanding from sequences:...
      Enigmatic and often vilified, viruses are now known to play important and possibly indispensable roles in the biology and ecology of cellular organisms. Evidence of viral impacts are everywh...
      Speaker: K. Eric Wommack
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 10, 2020 | 7:30 AM
      Keynote Presentation: Discovery of a gene-microbiome interaction in lung cancer: lessons learned and future directions
      Keynote Presentation: Discovery of a gene-microbiome interaction...
      The selective pressure placed on the resident microbiota by local changes in the host environment – DNA damage, chronic inflammation, metabolic shifts, barrier damage, reduced immunosu...
      Speaker: K. Leigh Greathouse, PhD, MPH, MS, RD
      Presented at: Microbiology Week Virtual Event Series 2020
      3
      SEP 10, 2020 | 12:00 AM
      Long read sequencing of the 16S-23S rRNA operon to characterize gut microbial changes associated with multiple sclerosis
      Long read sequencing of the 16S-23S rRNA operon to characterize...
      The microbiome has emerged as a major contributor to human health and disease. Numerous sources implicate shifts in the gut microbiome as potentially pathologic for a variety of autoimmune d...
      Speaker: Erin Longbrake, MD, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 10, 2020 | 12:00 AM
      Insights into Aquatic Biofilm Dynamics by High-Throughput Identification of Bacterial Isolates and Full-Length 16S rRNA Gene Surveys
      Insights into Aquatic Biofilm Dynamics by High-Throughput Identification...
      Microbial biofilms form on all aquatic surfaces and can harbor pathogenic bacteria. In the aquaculture industry, Flavobacteria species can cause serious diseases and lead to high mortality....
      Speaker: Joerg Graf, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 10, 2020 | 12:00 AM
      A novel strategy to investigate longitudinal changes within the gut microbiome: Insights from mouse models of sepsis and Alzheimer's disease
      A novel strategy to investigate longitudinal changes within the...
      Sepsis is a life-threatening condition that is caused by the immune system’s inability to respond appropriately to an infection. How sepsis can change the gut microbiome in ways that a...
      Speaker: Candice M. Brown, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 10, 2020 | 12:00 AM
      Identifying and linking antimicrobial resistance genes in metagenomes with new DNA sequencing technologies
      Identifying and linking antimicrobial resistance genes in metagenomes...
      The transfer of antimicrobial resistance genes (ARG) to pathogenic microbes is a major concern in modern medicine. Antibiotic therapies are often rendered ineffective by horizontal acquisiti...
      Speaker: Derek Bickhart, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      4
      SEP 10, 2020 | 12:00 AM
      Precision infectious disease discovery using next-generation sequencing and AI to provide insights into respiratory, urine, and stool samples
      Precision infectious disease discovery using next-generation sequencing...
      Lessons around leveraging high-complexity next-generation sequencing tests for precision infectious disease discovery to guide patient treatment and improve health outcomes. Learning Objecti...
      Speaker: Niamh O'Hara, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 09, 2020 | 12:00 AM
      Environmental stress shapes the evolution of a plant viruses towards a mutualistic relationship with its host
      Environmental stress shapes the evolution of a plant viruses towards...
      Traditionally, virology has been focused in studying the pathogenic effect of viruses. In the recent years, however, this perception is changing and viruses are being studied as mutualistic...
      Speaker: Santiago F. Elena
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      SEP 08, 2020 | 11:00 PM
      Nanoparticle-based next-generation influenza vaccines
      Nanoparticle-based next-generation influenza vaccines
      Most currently used conventional influenza vaccines are based on 1940s technology. Advances in immunogen design and vaccine delivery emerging over the last decade open novel opportunities fo...
      Speaker: Masaru Kanekiyo, DVM, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
      JUL 02, 2020 | 12:45 PM
      Strategies to normalize miRNA expression in serum and plasma
      Strategies to normalize miRNA expression in serum and plasma
      MicroRNA(miRNA) are short non-coding single stranded RNA molecules that regulate gene expression at the post transcriptional level. They are known to play a critical role in multiple biologi...
      Speaker: Emily Zeringer , Harita Veereshlingam, PhD
      Presented at: APJ Virtual Genetic Solutions Tour 2020
      2
    SEP 08, 2021 | 12:00 AM
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
    The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
    Speaker: Ramy K. Aziz, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    1
    JUL 28, 2021 | 10:00 AM
    GMP Cleanroom Routine Environmental Monitoring & 21CFR part 11 Data Integrity
    GMP Cleanroom Routine Environmental Monitoring & 21CFR part 11...
    Date: July 28, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Routine Environmental Monitoring in GMP cleanrooms is a manual process and is usually complex, involving thousands of sample data points...
    Speaker: Tony Harrison
    Sponsored By: Beckman Coulter Life Sciences
    11
    JUN 29, 2021 | 10:00 AM
    Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2 Variants
    Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2...
    Date: June 29, 2021 Time: 10:00am (PDT), 1:00pm (EDT) SARS-CoV-2 continues to evolve and surveillance of variants is a necessity. Routine analysis of genetic sequence data allows the identif...
    Speaker: Donna Wolk, MHA, PhD, D(ABMM)
    Sponsored By: Diasorin
    16
    JUN 22, 2021 | 10:00 AM
    Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
    Can AI powered diagnostics revolutionize antimicrobial stewardship?...
    Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
    Speaker: Dr. Arne Materna
    Sponsored By: OpGen, Inc.
    7
    JUN 16, 2021 | 11:00 AM
    Implementation of a High-Throughput Wastewater SARS-CoV-2 Detection Method: Providing Actionable Data to your County or Campus
    Implementation of a High-Throughput Wastewater SARS-CoV-2 Detection...
    Date: June 16, 2021 Time: 11:00am (PDT), 2:00pm (EDT) Large-scale wastewater surveillance can be used to help communities monitor infection dynamics for SARS-CoV-2. Wide-spread implementatio...
    Speaker: Smruthi Karthikeyan, PhD
    Sponsored By: Ceres Nanosciences
    10
     
     
  • MAY 27, 2021 | 11:00 AM
    Planning to Succeed - How and where standardization can improve your microbiome studies
    Planning to Succeed - How and where standardization can improve...
    Date: May 27, 2021 Time: 11:00am PDT, 2:00pm EDT Microbiome studies often suffer from issues that recent technological advances can solve easily. In this seminar, we will walk through planni...
    Speaker: Dr. Julia Cope, PhD.
    Sponsored By: Mawi DNA Technologies
    7 3
    MAY 27, 2021 | 10:00 AM
    Changes to USP <1788> Subvisible Particulate Matter
    Changes to USP <1788> Subvisible Particulate Matter
    DATE: May 27, 2021 TIME: 11:00am PDT A revised version of the USP chapter on Total Organic Carbon (TOC) USP<643> was published recently and will become official on 1 st May 2021. This...
    Speaker: Tony Harrison
    Sponsored By: Beckman Coulter Life Sciences
    5
    APR 28, 2021 | 11:00 AM
    Changes to USP <643> Total Organic Carbon for Pharmaceutical Grade Waters
    Changes to USP <643> Total Organic Carbon for Pharmaceutical Grade...
    DATE: April 28, 2021 TIME: 11:00am PDT A revised version of the USP chapter on Total Organic Carbon (TOC) USP<643> was published recently and will become official on 1 st May 2021. Thi...
    Speaker: Tony Harrison
    Sponsored By: Beckman Coulter Life Sciences
    5
    APR 20, 2021 | 12:00 AM
    C.E. CREDITS
    Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
    Low error rate long-reads enable the identification of long variant...
    Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
    Speaker: Derek Bickhart, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
    SEP 30, 2020 | 1:30 PM
    Harnessing novel CRISPR systems for genome engineering
    Harnessing novel CRISPR systems for genome engineering
    RNA plays important and diverse roles in biology, but molecular tools to manipulate and measure RNA are limited. We demonstrate that RNA-targeting CRISPR effector Cas13 can be engineered for...
    Speaker: Omar Abudayyeh, PhD , Jonathan Gootenberg, PhD
    Presented at: CRISPR Virtual Event Series 2020
    4
     
     
  • SEP 30, 2020 | 9:00 AM
    Massively parallel microbial genome engineering using the Onyxâ„¢ Platform
    Massively parallel microbial genome engineering using the Onyxâ„¢...
    While transformative, first-generation CRISPR technologies remain limited across multiple important dimensions including scalability, editing efficiency, types of modifications available, an...
    Speaker: Nandini Krishnamurthy, PhD
    Presented at: CRISPR Virtual Event Series 2020
    Sponsored By: Inscripta
    2
    SEP 10, 2020 | 2:00 PM
    Dynamic live yeast and bacterial cell imaging using CellASIC ONIX2 microfluidic platform
    Dynamic live yeast and bacterial cell imaging using CellASIC ONIX2...
    While live cell imaging offers advantages over traditional static imaging, this approach has been challenging for studying microbes due to the difficulty in tracking very small cells in a si...
    Speaker: Cindy Chen, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    Sponsored By: MilliporeSigma
    1
    SEP 10, 2020 | 12:00 PM
    Bacterial strain typing and genomics characterization of multi-drug resistance with QIAGEN CLC Genomics Workbench
    Bacterial strain typing and genomics characterization of multi-drug...
    In this webinar, we will present QIAGEN CLC Genomics Workbench and its utility for bacterial isolate identification, strain discrimination using core genome multi-locus typing (cgMLST) and d...
    Speaker: Jonathan Jacobs, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    Sponsored By: QIAGEN
    2
    SEP 10, 2020 | 11:00 AM
    Optimizing the extraction of human microbiome samples
    Optimizing the extraction of human microbiome samples
    Learning Objectives: 1. Understand the challenges of extracting DNA from human samples for microbiome analysis, and learn about the best technologies for accomplishing this 2. Learn about pr...
    Speaker: Dominic O'Neil, MS, MBA
    Presented at: Microbiology Week Virtual Event Series 2020
    Sponsored By: QIAGEN
    2
    SEP 10, 2020 | 10:00 AM
    Keynote Presentation: Squeezing out understanding from sequences: Genome to Phenome Connections in Viruses of Microbes
    Keynote Presentation: Squeezing out understanding from sequences:...
    Enigmatic and often vilified, viruses are now known to play important and possibly indispensable roles in the biology and ecology of cellular organisms. Evidence of viral impacts are everywh...
    Speaker: K. Eric Wommack
    Presented at: Microbiology Week Virtual Event Series 2020
    1
     
     
  • SEP 10, 2020 | 7:30 AM
    Keynote Presentation: Discovery of a gene-microbiome interaction in lung cancer: lessons learned and future directions
    Keynote Presentation: Discovery of a gene-microbiome interaction...
    The selective pressure placed on the resident microbiota by local changes in the host environment – DNA damage, chronic inflammation, metabolic shifts, barrier damage, reduced immunosu...
    Speaker: K. Leigh Greathouse, PhD, MPH, MS, RD
    Presented at: Microbiology Week Virtual Event Series 2020
    3
    SEP 10, 2020 | 12:00 AM
    Long read sequencing of the 16S-23S rRNA operon to characterize gut microbial changes associated with multiple sclerosis
    Long read sequencing of the 16S-23S rRNA operon to characterize...
    The microbiome has emerged as a major contributor to human health and disease. Numerous sources implicate shifts in the gut microbiome as potentially pathologic for a variety of autoimmune d...
    Speaker: Erin Longbrake, MD, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 10, 2020 | 12:00 AM
    Insights into Aquatic Biofilm Dynamics by High-Throughput Identification of Bacterial Isolates and Full-Length 16S rRNA Gene Surveys
    Insights into Aquatic Biofilm Dynamics by High-Throughput Identification...
    Microbial biofilms form on all aquatic surfaces and can harbor pathogenic bacteria. In the aquaculture industry, Flavobacteria species can cause serious diseases and lead to high mortality....
    Speaker: Joerg Graf, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 10, 2020 | 12:00 AM
    A novel strategy to investigate longitudinal changes within the gut microbiome: Insights from mouse models of sepsis and Alzheimer's disease
    A novel strategy to investigate longitudinal changes within the...
    Sepsis is a life-threatening condition that is caused by the immune system’s inability to respond appropriately to an infection. How sepsis can change the gut microbiome in ways that a...
    Speaker: Candice M. Brown, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 10, 2020 | 12:00 AM
    Identifying and linking antimicrobial resistance genes in metagenomes with new DNA sequencing technologies
    Identifying and linking antimicrobial resistance genes in metagenomes...
    The transfer of antimicrobial resistance genes (ARG) to pathogenic microbes is a major concern in modern medicine. Antibiotic therapies are often rendered ineffective by horizontal acquisiti...
    Speaker: Derek Bickhart, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    4
     
     
  • SEP 10, 2020 | 12:00 AM
    Precision infectious disease discovery using next-generation sequencing and AI to provide insights into respiratory, urine, and stool samples
    Precision infectious disease discovery using next-generation sequencing...
    Lessons around leveraging high-complexity next-generation sequencing tests for precision infectious disease discovery to guide patient treatment and improve health outcomes. Learning Objecti...
    Speaker: Niamh O'Hara, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 09, 2020 | 12:00 AM
    Environmental stress shapes the evolution of a plant viruses towards a mutualistic relationship with its host
    Environmental stress shapes the evolution of a plant viruses towards...
    Traditionally, virology has been focused in studying the pathogenic effect of viruses. In the recent years, however, this perception is changing and viruses are being studied as mutualistic...
    Speaker: Santiago F. Elena
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    SEP 08, 2020 | 11:00 PM
    Nanoparticle-based next-generation influenza vaccines
    Nanoparticle-based next-generation influenza vaccines
    Most currently used conventional influenza vaccines are based on 1940s technology. Advances in immunogen design and vaccine delivery emerging over the last decade open novel opportunities fo...
    Speaker: Masaru Kanekiyo, DVM, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
    JUL 02, 2020 | 12:45 PM
    Strategies to normalize miRNA expression in serum and plasma
    Strategies to normalize miRNA expression in serum and plasma
    MicroRNA(miRNA) are short non-coding single stranded RNA molecules that regulate gene expression at the post transcriptional level. They are known to play a critical role in multiple biologi...
    Speaker: Emily Zeringer , Harita Veereshlingam, PhD
    Presented at: APJ Virtual Genetic Solutions Tour 2020
    2
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