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    Microbiome and diseases

    The microbiome describes the microbes (such as bacteria, fungi, viruses) that live in and on our bodies. The distribution and presence of microbes can have a significant impact on health and disease. Further, alterations in the microbiome can impact how a patient will respond to treatments prescribed for diseases.

    Webinars

    • SEP 13, 2018 | 7:30 AM
      Keynote Presentation: Tracking the Resistome in One Health Surveillance
      Keynote Presentation: Tracking the Resistome in One Health Surveillance
      In the US, the National Antimicrobial Resistance Monitoring System has been using WGS of Salmonella as a tool of routine surveillance since 2013. To date, NARMS has generated MIC and WGS data...
      Speaker: Patrick McDermott, MS, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      2
      SEP 13, 2018 | 6:00 AM
      The Hurricane Microbiome Project: Environmental Exposures and Population Health
      The Hurricane Microbiome Project: Environmental Exposures and...
      The Alkek Center for Metagenomics and Microbiome Research (CMMR) at Baylor College of Medicine is pursuing numerous research and development efforts in the study of how the microbiome impacts...
      Speaker: Joseph Petrosino, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 13, 2018 | 6:00 AM
      The Evolution of Diverse, Ubiquitous CRESS DNA Viruses
      The Evolution of Diverse, Ubiquitous CRESS DNA Viruses
      In the US, the National Antimicrobial Resistance Monitoring System has been using WGS of Salmonella as a tool of routine surveillance since 2013. To date, NARMS has generated MIC and WGS data...
      Speaker: Siobain Duffy, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 12, 2018 | 1:30 PM
      Connect Across 1000s of Expertly Curated Genomics Datasets Using QIAGEN's Immunology Focused DiseaseLand Database
      Connect Across 1000s of Expertly Curated Genomics Datasets Using...
      DiseaseLand is an integrated genomics database and visualization software that helps researchers explore 1000s of public and private datasets covering, but not limited to therapeutic areas su...
      Speaker: Lucy Williams, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: QIAGEN
      1
      SEP 12, 2018 | 1:30 PM
      The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic Bacteria
      The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic...
      Reducing the impact of infectious diseases is becoming increasingly vital as the prevalence of antimicrobial resistance (AMR) continues to rise, threatening the effective prevention and treat...
      Speaker: Julie Russell, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 12, 2018 | 12:00 PM
      Antimicrobial Resistance Identification, Strain Typing, and Assay Design with CLC Genomics Workbench
      Antimicrobial Resistance Identification, Strain Typing, and Assay...
      Whole genome sequencing of bacterial isolates via next-generation sequencing is becoming a standard approach for clinical microbiology and bio-surveillance labs seeking to conduct outbreak in...
      Speaker: Winnie Ridderberg, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: QIAGEN
      3
      SEP 12, 2018 | 12:00 PM
      ONETest PathoGenome: A Target Hybridization-Based Next-Generation Sequencing Assay to Tackle Undiagnosed Infections
      ONETest PathoGenome: A Target Hybridization-Based Next-Generation...
      Every year, approximately 800,000 critically ill patients are hospitals in the USA with undiagnosed infections. The only option is to treat these patients with broad-spectrum antimicrobial th...
      Speaker: Mohammad Qadir, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1 1
      SEP 12, 2018 | 10:30 AM
      Bacteria that Eat Electricity: Understanding Biocathodes Using Culture Independent Techniques
      Bacteria that Eat Electricity: Understanding Biocathodes Using...
      Some bacteria can use an electrode as an electron donor for respiration, generating an electrical current in the process. We are trying to understand a bacterial community that uses electrici...
      Speaker: Brian Eddie, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      2 1
      SEP 12, 2018 | 10:30 AM
      Laboratory Role in Diagnosis of Antiphospholipid Antibodies and Antiphospholipid Syndrome
      Laboratory Role in Diagnosis of Antiphospholipid Antibodies and...
      The ongoing research and scientific debate on pathophysiology, classification, nomenclature and diagnosis of antiphospholipid syndrome illustrates the complexity of cellular membranes, their...
      Speaker: Vladimir Vidanovic, MD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      2
      SEP 12, 2018 | 9:00 AM
      The Persistence of Pertussis and the Prognostic Value of Bordetella Detection
      The Persistence of Pertussis and the Prognostic Value of Bordetella...
      Whooping cough caused by Bordetella infection has resurged in recent years.  Dr. Karissa Culbreath will discuss the clinical presentation of Bordetella infection and its public health im...
      Speaker: Karissa Culbreath, Ph.D., D(ABMM)
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: Diasorin
      1
      SEP 12, 2018 | 9:00 AM
      Antimicrobial Stewardship - Its Role in Managing Antibiotic Resistance
      Antimicrobial Stewardship - Its Role in Managing Antibiotic Resistance
      Antibiotic resistance is a national and global public health crisis.  Each year in the United States (US), at least 2 million people become infected with antibiotic-resistant bacteria an...
      Speaker: Haley Appaneal, Pharm D.
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      3
      SEP 12, 2018 | 7:30 AM
      Keynote Presentation: Multiplex Molecular Panels in Syndromic Infectious Diseases Testing
      Keynote Presentation: Multiplex Molecular Panels in Syndromic...
      There are new generations of comprehensive multiplex molecular panels available for infectious diseases syndromic diagnostics. They are able to rapidly detect and identify the most common pat...
      Speaker: Vera Tesic, MD, MS, D (ABMM), M (ASCP)
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      3
      SEP 12, 2018 | 6:00 AM
      Advancing Metagenomic Tools for Monitoring Antibiotic Resistance and Pathogen Gene Markers in Water and the Environment
      Advancing Metagenomic Tools for Monitoring Antibiotic Resistance...
      Next-generation DNA sequencing has opened new possibilities for microbial water quality monitoring, particularly for addressing emerging concerns like antibiotic resistance and opportunistic...
      Speaker: Amy Pruden, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      3
      SEP 12, 2018 | 6:00 AM
      Accelerating Tuberculosis Elimination with Genomics
      Accelerating Tuberculosis Elimination with Genomics
      The WHO has set ambitious targets for eliminating TB in low-incidence countries such as the US and Canada. While it’s true that the majority of TB cases in these settings arise from rea...
      Speaker: Jennifer Gardy, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      3
      JUN 21, 2018 | 7:30 AM
      Keynote Presentation: Paving the Path Towards Precision Medicine in Inflammatory Bowel Diseases
      Keynote Presentation: Paving the Path Towards Precision Medicine...
      Crohn’s disease and ulcerative colitis also known as inflammatory bowel diseases or IBD, are characterized by chronic, recurrent inflammation of the gastrointestinal tract, which result...
      Speaker: Andres Hurtado-Lorenzo, PhD
      Presented at: Precision Medicine Virtual Event Series 2018
      1
      MAY 10, 2018 | 6:00 AM
      Differential Abundance Analysis for Microbial Marker-Gene Surveys
      Differential Abundance Analysis for Microbial Marker-Gene Surveys
      We introduce a differential abundance analysis method for the analysis of sparse high-throughput data from large-scale surveys of marker genes for microbial communities. Our approach relies o...
      Speaker: Joseph Paulson, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2018
      2
      MAR 22, 2018 | 7:00 AM
      Emerging Diagnostic Strategies to Support C. difficile Infection Control
      Emerging Diagnostic Strategies to Support C. difficile Infection...
      DATE: March 22, 2018TIME: 07:00am PDT, 10:00am EDTClostridium difficile (C. diff) is a highly problematic healthcare-associated infection that is easily spread and often results in poor...
      Speaker: Lance Peterson, MD, FASCP, FIDSA, FAAM, FSHEA
      Sponsored By: Roche Diagnostics
      8
      JAN 30, 2018 | 9:00 AM
      WEBINAR: Metagenomics and base modifications from long, short, and linked-reads
      WEBINAR: Metagenomics and base modifications from long, short,...
      DATE: January 30, 2018TIME: 9:00AM PST, 12:00PM ESTInfectious disease surveillance and monitoring is critical in settings where disease outbreaks and antibiotic resistance can dramatica...
      Speaker: Christopher Mason, PhD , Shuiquan Tang, PhD
      Sponsored By: Zymo Research
      6 1
      NOV 08, 2017 | 1:30 PM
      Guiding Clinical Laboratory Integration of Next-Generation Sequencing to Assure Quality Testing
      Guiding Clinical Laboratory Integration of Next-Generation Sequencing...
      The integration of next-generation sequencing (NGS) tests into clinical laboratory practice across medical disciplines provides medically actionable data that in some cases are not otherwise...
      Speaker: Ira Lubin, PhD, FACMG
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2017
      2
      SEP 28, 2017 | 12:00 PM
      Back to basics: Fundamental concepts and special considerations in RNA isolation
      Back to basics: Fundamental concepts and special considerations...
      How are your RNA yields? Some sample types present special challenges in RNA purification and analysis. In this webinar, we will discuss and provide tips for the following topics: &b...
      Speaker: Abhishek Sharma
      Presented at: Cell Biology Virtual Event Series 2017
      2
      SEP 28, 2017 | 10:30 AM
      Engineering stem cell biology for disease modelling and therapeutics
      Engineering stem cell biology for disease modelling and therapeutics
      Stem cells can self-renew and differentiate into multiple different cell types. Engineering of stem cells has enabled new methods to study development and organogenesis in humans as well as d...
      Speaker: Amr Abdeen, PhD
      Presented at: Cell Biology Virtual Event Series 2017
      1
      SEP 28, 2017 | 9:00 AM
      Fine tuning of myosin activity shapes actomyosin network organization and tissue contractility of the C. elegans spermatheca
      Fine tuning of myosin activity shapes actomyosin network organization...
      Contractile non-muscle cells, including smooth muscle and myoepithelial cells, provide the mechanical forces required for tissue homeostasis in numerous organ systems. For example, smooth mus...
      Speaker: Alison Wirshing, PhD
      Presented at: Cell Biology Virtual Event Series 2017
      1
      SEP 28, 2017 | 7:30 AM
      Keynote Presentation: RNA-targeting CRISPR and application to diseases
      Keynote Presentation: RNA-targeting CRISPR and application to...
      I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
      Speaker: Gene Yeo, PhD
      Presented at: Cell Biology Virtual Event Series 2017
      1
      SEP 27, 2017 | 12:00 PM
      CRISPR-Cas9 genome engineering: Experimental Design and Applications
      CRISPR-Cas9 genome engineering: Experimental Design and Applications
      The manipulation of the genome to study disease, evaluate drug targets and to stratify patient populations is now a widely accepted concept in the field. At Horizon Discovery, genome engineer...
      Speaker: Danielle Folkard
      Presented at: Cell Biology Virtual Event Series 2017
      Sponsored By: Horizon Discovery
      2
    SEP 13, 2018 | 7:30 AM
    Keynote Presentation: Tracking the Resistome in One Health Surveillance
    Keynote Presentation: Tracking the Resistome in One Health Surveillance
    In the US, the National Antimicrobial Resistance Monitoring System has been using WGS of Salmonella as a tool of routine surveillance since 2013. To date, NARMS has generated MIC and WGS data...
    Speaker: Patrick McDermott, MS, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    2
    SEP 13, 2018 | 6:00 AM
    The Hurricane Microbiome Project: Environmental Exposures and Population Health
    The Hurricane Microbiome Project: Environmental Exposures and...
    The Alkek Center for Metagenomics and Microbiome Research (CMMR) at Baylor College of Medicine is pursuing numerous research and development efforts in the study of how the microbiome impacts...
    Speaker: Joseph Petrosino, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
    SEP 13, 2018 | 6:00 AM
    The Evolution of Diverse, Ubiquitous CRESS DNA Viruses
    The Evolution of Diverse, Ubiquitous CRESS DNA Viruses
    In the US, the National Antimicrobial Resistance Monitoring System has been using WGS of Salmonella as a tool of routine surveillance since 2013. To date, NARMS has generated MIC and WGS data...
    Speaker: Siobain Duffy, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
    SEP 12, 2018 | 1:30 PM
    Connect Across 1000s of Expertly Curated Genomics Datasets Using QIAGEN's Immunology Focused DiseaseLand Database
    Connect Across 1000s of Expertly Curated Genomics Datasets Using...
    DiseaseLand is an integrated genomics database and visualization software that helps researchers explore 1000s of public and private datasets covering, but not limited to therapeutic areas su...
    Speaker: Lucy Williams, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: QIAGEN
    1
    SEP 12, 2018 | 1:30 PM
    The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic Bacteria
    The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic...
    Reducing the impact of infectious diseases is becoming increasingly vital as the prevalence of antimicrobial resistance (AMR) continues to rise, threatening the effective prevention and treat...
    Speaker: Julie Russell, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
     
     
  • SEP 12, 2018 | 12:00 PM
    Antimicrobial Resistance Identification, Strain Typing, and Assay Design with CLC Genomics Workbench
    Antimicrobial Resistance Identification, Strain Typing, and Assay...
    Whole genome sequencing of bacterial isolates via next-generation sequencing is becoming a standard approach for clinical microbiology and bio-surveillance labs seeking to conduct outbreak in...
    Speaker: Winnie Ridderberg, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: QIAGEN
    3
    SEP 12, 2018 | 12:00 PM
    ONETest PathoGenome: A Target Hybridization-Based Next-Generation Sequencing Assay to Tackle Undiagnosed Infections
    ONETest PathoGenome: A Target Hybridization-Based Next-Generation...
    Every year, approximately 800,000 critically ill patients are hospitals in the USA with undiagnosed infections. The only option is to treat these patients with broad-spectrum antimicrobial th...
    Speaker: Mohammad Qadir, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1 1
    SEP 12, 2018 | 10:30 AM
    Bacteria that Eat Electricity: Understanding Biocathodes Using Culture Independent Techniques
    Bacteria that Eat Electricity: Understanding Biocathodes Using...
    Some bacteria can use an electrode as an electron donor for respiration, generating an electrical current in the process. We are trying to understand a bacterial community that uses electrici...
    Speaker: Brian Eddie, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    2 1
    SEP 12, 2018 | 10:30 AM
    Laboratory Role in Diagnosis of Antiphospholipid Antibodies and Antiphospholipid Syndrome
    Laboratory Role in Diagnosis of Antiphospholipid Antibodies and...
    The ongoing research and scientific debate on pathophysiology, classification, nomenclature and diagnosis of antiphospholipid syndrome illustrates the complexity of cellular membranes, their...
    Speaker: Vladimir Vidanovic, MD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    2
    SEP 12, 2018 | 9:00 AM
    The Persistence of Pertussis and the Prognostic Value of Bordetella Detection
    The Persistence of Pertussis and the Prognostic Value of Bordetella...
    Whooping cough caused by Bordetella infection has resurged in recent years.  Dr. Karissa Culbreath will discuss the clinical presentation of Bordetella infection and its public health im...
    Speaker: Karissa Culbreath, Ph.D., D(ABMM)
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: Diasorin
    1
     
     
  • SEP 12, 2018 | 9:00 AM
    Antimicrobial Stewardship - Its Role in Managing Antibiotic Resistance
    Antimicrobial Stewardship - Its Role in Managing Antibiotic Resistance
    Antibiotic resistance is a national and global public health crisis.  Each year in the United States (US), at least 2 million people become infected with antibiotic-resistant bacteria an...
    Speaker: Haley Appaneal, Pharm D.
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    3
    SEP 12, 2018 | 7:30 AM
    Keynote Presentation: Multiplex Molecular Panels in Syndromic Infectious Diseases Testing
    Keynote Presentation: Multiplex Molecular Panels in Syndromic...
    There are new generations of comprehensive multiplex molecular panels available for infectious diseases syndromic diagnostics. They are able to rapidly detect and identify the most common pat...
    Speaker: Vera Tesic, MD, MS, D (ABMM), M (ASCP)
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    3
    SEP 12, 2018 | 6:00 AM
    Advancing Metagenomic Tools for Monitoring Antibiotic Resistance and Pathogen Gene Markers in Water and the Environment
    Advancing Metagenomic Tools for Monitoring Antibiotic Resistance...
    Next-generation DNA sequencing has opened new possibilities for microbial water quality monitoring, particularly for addressing emerging concerns like antibiotic resistance and opportunistic...
    Speaker: Amy Pruden, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    3
    SEP 12, 2018 | 6:00 AM
    Accelerating Tuberculosis Elimination with Genomics
    Accelerating Tuberculosis Elimination with Genomics
    The WHO has set ambitious targets for eliminating TB in low-incidence countries such as the US and Canada. While it’s true that the majority of TB cases in these settings arise from rea...
    Speaker: Jennifer Gardy, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    3
    JUN 21, 2018 | 7:30 AM
    Keynote Presentation: Paving the Path Towards Precision Medicine in Inflammatory Bowel Diseases
    Keynote Presentation: Paving the Path Towards Precision Medicine...
    Crohn’s disease and ulcerative colitis also known as inflammatory bowel diseases or IBD, are characterized by chronic, recurrent inflammation of the gastrointestinal tract, which result...
    Speaker: Andres Hurtado-Lorenzo, PhD
    Presented at: Precision Medicine Virtual Event Series 2018
    1
     
     
  • MAY 10, 2018 | 6:00 AM
    Differential Abundance Analysis for Microbial Marker-Gene Surveys
    Differential Abundance Analysis for Microbial Marker-Gene Surveys
    We introduce a differential abundance analysis method for the analysis of sparse high-throughput data from large-scale surveys of marker genes for microbial communities. Our approach relies o...
    Speaker: Joseph Paulson, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2018
    2
    MAR 22, 2018 | 7:00 AM
    Emerging Diagnostic Strategies to Support C. difficile Infection Control
    Emerging Diagnostic Strategies to Support C. difficile Infection...
    DATE: March 22, 2018TIME: 07:00am PDT, 10:00am EDTClostridium difficile (C. diff) is a highly problematic healthcare-associated infection that is easily spread and often results in poor...
    Speaker: Lance Peterson, MD, FASCP, FIDSA, FAAM, FSHEA
    Sponsored By: Roche Diagnostics
    8
    JAN 30, 2018 | 9:00 AM
    WEBINAR: Metagenomics and base modifications from long, short, and linked-reads
    WEBINAR: Metagenomics and base modifications from long, short,...
    DATE: January 30, 2018TIME: 9:00AM PST, 12:00PM ESTInfectious disease surveillance and monitoring is critical in settings where disease outbreaks and antibiotic resistance can dramatica...
    Speaker: Christopher Mason, PhD , Shuiquan Tang, PhD
    Sponsored By: Zymo Research
    6 1
    NOV 08, 2017 | 1:30 PM
    Guiding Clinical Laboratory Integration of Next-Generation Sequencing to Assure Quality Testing
    Guiding Clinical Laboratory Integration of Next-Generation Sequencing...
    The integration of next-generation sequencing (NGS) tests into clinical laboratory practice across medical disciplines provides medically actionable data that in some cases are not otherwise...
    Speaker: Ira Lubin, PhD, FACMG
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2017
    2
    SEP 28, 2017 | 12:00 PM
    Back to basics: Fundamental concepts and special considerations in RNA isolation
    Back to basics: Fundamental concepts and special considerations...
    How are your RNA yields? Some sample types present special challenges in RNA purification and analysis. In this webinar, we will discuss and provide tips for the following topics: &b...
    Speaker: Abhishek Sharma
    Presented at: Cell Biology Virtual Event Series 2017
    2
     
     
  • SEP 28, 2017 | 10:30 AM
    Engineering stem cell biology for disease modelling and therapeutics
    Engineering stem cell biology for disease modelling and therapeutics
    Stem cells can self-renew and differentiate into multiple different cell types. Engineering of stem cells has enabled new methods to study development and organogenesis in humans as well as d...
    Speaker: Amr Abdeen, PhD
    Presented at: Cell Biology Virtual Event Series 2017
    1
    SEP 28, 2017 | 9:00 AM
    Fine tuning of myosin activity shapes actomyosin network organization and tissue contractility of the C. elegans spermatheca
    Fine tuning of myosin activity shapes actomyosin network organization...
    Contractile non-muscle cells, including smooth muscle and myoepithelial cells, provide the mechanical forces required for tissue homeostasis in numerous organ systems. For example, smooth mus...
    Speaker: Alison Wirshing, PhD
    Presented at: Cell Biology Virtual Event Series 2017
    1
    SEP 28, 2017 | 7:30 AM
    Keynote Presentation: RNA-targeting CRISPR and application to diseases
    Keynote Presentation: RNA-targeting CRISPR and application to...
    I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
    Speaker: Gene Yeo, PhD
    Presented at: Cell Biology Virtual Event Series 2017
    1
    SEP 27, 2017 | 12:00 PM
    CRISPR-Cas9 genome engineering: Experimental Design and Applications
    CRISPR-Cas9 genome engineering: Experimental Design and Applications
    The manipulation of the genome to study disease, evaluate drug targets and to stratify patient populations is now a widely accepted concept in the field. At Horizon Discovery, genome engineer...
    Speaker: Danielle Folkard
    Presented at: Cell Biology Virtual Event Series 2017
    Sponsored By: Horizon Discovery
    2
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