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    Transcriptomics

    Transcriptomics: is the study of the transcriptome-the complete set of RNA transcripts that are produced by the genome, under specific circumstances or in a specific cell-using high-throughput methods, such as microarray analysis.

    Webinars

    • NOV 17, 2016 | 3:00 AM
      Genetic variability of ps-iPSC and related blood and fibroblasts - somatic mutations
      Genetic variability of ps-iPSC and related blood and fibroblasts...
      The generation of induced pluripotent stem cells (iPSCs) from adult easily accessible somatic tissues was introduced ten years ago. This technology has revolutionized our opportunities to stu...
      Speaker: KEYNOTE: Silke Rickert-Sperling, PhD
      Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
      8 1
      NOV 16, 2016 | 8:00 AM
      The important role of lncRNAs in breast cancer
      The important role of lncRNAs in breast cancer
      DATE:  November 16, 2016 TIME:  8:00am PT, 11:00am ET  Breast cancer is the most commonly diagnosed cancer in women and is the second leading cause of cancer death among wo...
      Speaker: Rebecca DeVaux, PhD , Alfredo Hidalgo-Miranda, PhD
      Sponsored By: Affymetrix, Affymetrix
      8
      NOV 04, 2016 | 10:00 AM
      Applying a multi-omics approach to tumor biomarker discovery - case studies
      Applying a multi-omics approach to tumor biomarker discovery -...
      DATE:  November 4, 2016 TIME:  10:00am PT, 1:00pm ET How do you develop clinically relevant biomarkers? Systematic tumor profiling with multi-omics tools and rapid analytical...
      Speaker: Antonia Sepulveda, MD, PhD , Yang Yang, PhD , Tamara Lotan, MD
      Sponsored By: Affymetrix, Affymetrix
      10 1
      NOV 03, 2016 | 6:00 AM
      Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
      Mutation Detection Simplified: From Liquid Biopsy in clinical...
      Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
      Speaker: Gerd Michel, PhD , Lou Welebob
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
      5
      OCT 19, 2016 | 9:00 AM
      Controlling RNA-Seq Experiments Using Spike-In RNA Variants
      Controlling RNA-Seq Experiments Using Spike-In RNA Variants
      DATE: October 19, 2016 TIME:  9:00 AM PT, 12:00 PM ET, 6:00 PM CEST    Hardly anyone would run an RNA gel without a ladder, but transcriptomes are mostly sequenced without ...
      Speaker: Lukas Paul, PhD
      Sponsored By: Lexogen, Lexogen
      7 2
      OCT 18, 2016 | 1:00 PM
      Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative Medicine Models of Brain Diseases
      Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative...
      Induced pluripotent stem cells derived from patient cells have emerged as complementary tools to study human neurological disorders.  Neurxstem Inc has generated human iPSC-derived synth...
      Speaker: Rene Anand, PhD
      Presented at: SyncD³ - Where drug discovery & development meet
      0
      OCT 06, 2016 | 10:30 AM
      Precision Genomics and Precision Medicine for Immuno-Oncology
      Precision Genomics and Precision Medicine for Immuno-Oncology
      Tumors often evade immune destruction by adapting and circumventing immune checkpoints to create resistance.  This adaptive immunity can be reversed to stimulate the endogenous immune re...
      Speaker: Erin Newburn, MS, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      0
      OCT 06, 2016 | 7:30 AM
      Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes Reveals Cellular Heterogeneity in Colorectal Cancer
      Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes...
      Intra-tumor heterogeneity is a major obstacle to cancer treatment. Existing single-cell studies of intra-tumor heterogeneity have largely focused on DNA mutations; functional heterogeneity is...
      Speaker: Shyam Prabhakar, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      2
      OCT 05, 2016 | 10:30 AM
      Comparative genetic and transcriptome analyses of Hepatocellular Carcinoma and Endometrioid Endometrial Carcinoma highlight common molecular and biological processes
      Comparative genetic and transcriptome analyses of Hepatocellular...
      Hepatocellular Carcinoma (HCC) and Endometrioid Endometrial Carcinoma (EEC) are two lethal diseases of public health importance worldwide. Understanding the mechanisms of tumor progression in...
      Speaker: Jean-Noel Billaud, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      0
      OCT 05, 2016 | 6:00 AM
      Unique molecular indices (UMI) and their application in detecting novel gene fusions and gene expression and genetic variation
      Unique molecular indices (UMI) and their application in detecting...
      Tumor heterogeneity has been known for a while but quantifying heterogeneity is still a challenge.  NGS is the method of choice in the analysis of tumor heterogeneity, however, there are...
      Speaker: Samuel Rulli, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      3
      OCT 04, 2016 | 8:00 AM
      Overcoming the Clinical Sample Bottleneck for Expression Studies
      Overcoming the Clinical Sample Bottleneck for Expression Studies
      DATE:  October 4, 2016 TIME:  8:00am PT, 11:00am ET Extracting robust expression data from clinical samples represents a unique opportunity to find actionable biomarkers. But it...
      Speaker: Mark Manary, MD , Sean Diehl, PhD
      Sponsored By: Affymetrix, Affymetrix
      4
      SEP 29, 2016 | 10:00 AM
      Advancing Personalized Medicine through whole-genome profiling
      Advancing Personalized Medicine through whole-genome profiling
      DATE:  September 29, 2016 TIME:  10:00am PT, 1:00pm ET One of the challenges with personalized medicine lies in the identification of robust, clinically relevant biomarkers. Tra...
      Speaker: Stewart Neill, MD
      Sponsored By: Affymetrix, Affymetrix
      10
      AUG 30, 2016 | 8:00 AM
      Directed differentiation of induced pluripotent stem cells to hepatic stellate cells
      Directed differentiation of induced pluripotent stem cells to...
      In healthy liver, quiescent hepatic stellate cells (HSCs) participate in the homeostasis of extracellular matrix and store vitamin A. After injury, HSCs activate and participate in the wound-...
      Speaker: Pau Sancho Bru, PhD
      Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
      1
      MAY 26, 2016 | 8:00 AM
      Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA Seq
      Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA...
      DATE:  May 26, 2016TIME:  8am pacific time, 11am eastern timeJoin us live and learn about a breakthrough in TCR sequencing using single-cell analysis.T cells recognize spe...
      Speaker: Mike Stubbington, PhD , Tapio Lonnberg, PhD
      Sponsored By: Standard BioTools, Standard BioTools
      8
      MAY 11, 2016 | 1:30 PM
      C.E. CREDITS
      Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor Composition
      Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor...
      Human breast tumors have been shown to exhibit extensive inter- and intra-tumor heterogeneity. While recent advances in genomic technologies have allowed us to deconvolute this heterogeneity,...
      Speaker: Ioannis (Jiannis) Ragoussis, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2016
      3
      MAY 11, 2016 | 12:00 PM
      Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
      Assembly and Analysis of Non-model Organism Transcriptomes Using...
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
      Speaker: Matthew Keyser, MS
      Presented at: Genetics and Genomics Virtual Event Series 2016
      2
      MAY 11, 2016 | 10:30 AM
      Whole Genome? The Future of High-Quality Genomes & Transcriptomes
      Whole Genome? The Future of High-Quality Genomes & Transcriptomes
      New approaches to generate high-quality representations of human genomes and transcriptomes are now becoming available. In contrast to short-read “Whole-Genome” re-sequencing meth...
      Speaker: Jonas Korlach, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2016
      2
      FEB 02, 2016 | 9:00 AM
      Arrays or RNA-Seq? Choosing the right tool for the job
      Arrays or RNA-Seq? Choosing the right tool for the job
      DATE: February 2nd, 2016 TIME:  9am pacific time, 12pm eastern time What is the most appropriate technology to empower your research?   Next generation sequencing (NGS) for RN...
      Speaker: Sridar Chittur, PhD, MBA , Yesim Gökmen-Polar, PhD
      Sponsored By: Affymetrix, Affymetrix
      11 3
      NOV 11, 2015 | 12:00 PM
      DNASTAR Software for Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
      DNASTAR Software for Accurate Variant Detection and Validation...
      DNASTAR offers an integrated suite of software for accurate assembly, alignment, and analysis of sequence data from all major next-generation sequencing platforms, supporting key workflows in...
      Speaker: Matthew Keyser, MS
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2015
      0
      OCT 01, 2015 | 9:00 AM
      RNA-editing in melanoma - Case for a sensitive analysis and interpretation platform for the resolution of a diverse molecular process and likely pathogenic variants
      RNA-editing in melanoma - Case for a sensitive analysis and interpretation...
      Of special interest in a clinical setting is the identification and interpretation of somatic variants from the DNA of a tumor/normal matched pair. Studies have shown that a large proportion...
      Speaker: Anika Joecker, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
      2
      SEP 30, 2015 | 1:30 PM
      Role of microRNA-mRNA interactions in Endometrioid Endometrial Carcinoma, a "Sample to Insight" biological exploration
      Role of microRNA-mRNA interactions in Endometrioid Endometrial...
      Endometrial adenoarcinoma is a common cause of gynecological cancer death in Europe and North America. The most dominant subtype, Endometrioid Endometrial Cancer (EEC) accounts for >80% of...
      Speaker: Jean-Noel Billaud, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
      2
      SEP 30, 2015 | 6:00 AM
      Comparative genome and transcriptome analysis of small cell numbers
      Comparative genome and transcriptome analysis of small cell numbers
      The genome determines changes of the transcription profile upon environmental changes and finally determines how a cell reacts. A comparative genome and transcriptome analysis of the same sam...
      Speaker: Christian Korfhage, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
      2
      SEP 03, 2015 | 3:00 PM
      Next-Generation Sequencing for Diagnosis and Surveillance of Emerging Infections
      Next-Generation Sequencing for Diagnosis and Surveillance of Emerging...
      Next-generation sequencing (NGS) technologies are powerful approaches for diagnosis and surveillance of emerging infections. Unbiased metagenomic NGS can detect the full spectrum of pathogen...
      Speaker: Charles Chiu, MD, PhD
      Presented at: Microbiology Virtual Event Series 2015
      2
      SEP 02, 2015 | 12:00 PM
      DNASTAR Software for Assembly and Analysis of Microbial Genomes
      DNASTAR Software for Assembly and Analysis of Microbial Genomes
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data for key NGS workflows, including microbial genome assembly. The DNASTAR assembly software is...
      Speaker: Matthew Keyser, MS
      Presented at: Microbiology Virtual Event Series 2015
      3
    NOV 17, 2016 | 3:00 AM
    Genetic variability of ps-iPSC and related blood and fibroblasts - somatic mutations
    Genetic variability of ps-iPSC and related blood and fibroblasts...
    The generation of induced pluripotent stem cells (iPSCs) from adult easily accessible somatic tissues was introduced ten years ago. This technology has revolutionized our opportunities to stu...
    Speaker: KEYNOTE: Silke Rickert-Sperling, PhD
    Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
    8 1
    NOV 16, 2016 | 8:00 AM
    The important role of lncRNAs in breast cancer
    The important role of lncRNAs in breast cancer
    DATE:  November 16, 2016 TIME:  8:00am PT, 11:00am ET  Breast cancer is the most commonly diagnosed cancer in women and is the second leading cause of cancer death among wo...
    Speaker: Rebecca DeVaux, PhD , Alfredo Hidalgo-Miranda, PhD
    Sponsored By: Affymetrix, Affymetrix
    8
    NOV 04, 2016 | 10:00 AM
    Applying a multi-omics approach to tumor biomarker discovery - case studies
    Applying a multi-omics approach to tumor biomarker discovery -...
    DATE:  November 4, 2016 TIME:  10:00am PT, 1:00pm ET How do you develop clinically relevant biomarkers? Systematic tumor profiling with multi-omics tools and rapid analytical...
    Speaker: Antonia Sepulveda, MD, PhD , Yang Yang, PhD , Tamara Lotan, MD
    Sponsored By: Affymetrix, Affymetrix
    10 1
    NOV 03, 2016 | 6:00 AM
    Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
    Mutation Detection Simplified: From Liquid Biopsy in clinical...
    Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
    Speaker: Gerd Michel, PhD , Lou Welebob
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
    5
    OCT 19, 2016 | 9:00 AM
    Controlling RNA-Seq Experiments Using Spike-In RNA Variants
    Controlling RNA-Seq Experiments Using Spike-In RNA Variants
    DATE: October 19, 2016 TIME:  9:00 AM PT, 12:00 PM ET, 6:00 PM CEST    Hardly anyone would run an RNA gel without a ladder, but transcriptomes are mostly sequenced without ...
    Speaker: Lukas Paul, PhD
    Sponsored By: Lexogen, Lexogen
    7 2
     
     
  • OCT 18, 2016 | 1:00 PM
    Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative Medicine Models of Brain Diseases
    Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative...
    Induced pluripotent stem cells derived from patient cells have emerged as complementary tools to study human neurological disorders.  Neurxstem Inc has generated human iPSC-derived synth...
    Speaker: Rene Anand, PhD
    Presented at: SyncD³ - Where drug discovery & development meet
    0
    OCT 06, 2016 | 10:30 AM
    Precision Genomics and Precision Medicine for Immuno-Oncology
    Precision Genomics and Precision Medicine for Immuno-Oncology
    Tumors often evade immune destruction by adapting and circumventing immune checkpoints to create resistance.  This adaptive immunity can be reversed to stimulate the endogenous immune re...
    Speaker: Erin Newburn, MS, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    0
    OCT 06, 2016 | 7:30 AM
    Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes Reveals Cellular Heterogeneity in Colorectal Cancer
    Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes...
    Intra-tumor heterogeneity is a major obstacle to cancer treatment. Existing single-cell studies of intra-tumor heterogeneity have largely focused on DNA mutations; functional heterogeneity is...
    Speaker: Shyam Prabhakar, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    2
    OCT 05, 2016 | 10:30 AM
    Comparative genetic and transcriptome analyses of Hepatocellular Carcinoma and Endometrioid Endometrial Carcinoma highlight common molecular and biological processes
    Comparative genetic and transcriptome analyses of Hepatocellular...
    Hepatocellular Carcinoma (HCC) and Endometrioid Endometrial Carcinoma (EEC) are two lethal diseases of public health importance worldwide. Understanding the mechanisms of tumor progression in...
    Speaker: Jean-Noel Billaud, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    0
    OCT 05, 2016 | 6:00 AM
    Unique molecular indices (UMI) and their application in detecting novel gene fusions and gene expression and genetic variation
    Unique molecular indices (UMI) and their application in detecting...
    Tumor heterogeneity has been known for a while but quantifying heterogeneity is still a challenge.  NGS is the method of choice in the analysis of tumor heterogeneity, however, there are...
    Speaker: Samuel Rulli, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    3
     
     
  • OCT 04, 2016 | 8:00 AM
    Overcoming the Clinical Sample Bottleneck for Expression Studies
    Overcoming the Clinical Sample Bottleneck for Expression Studies
    DATE:  October 4, 2016 TIME:  8:00am PT, 11:00am ET Extracting robust expression data from clinical samples represents a unique opportunity to find actionable biomarkers. But it...
    Speaker: Mark Manary, MD , Sean Diehl, PhD
    Sponsored By: Affymetrix, Affymetrix
    4
    SEP 29, 2016 | 10:00 AM
    Advancing Personalized Medicine through whole-genome profiling
    Advancing Personalized Medicine through whole-genome profiling
    DATE:  September 29, 2016 TIME:  10:00am PT, 1:00pm ET One of the challenges with personalized medicine lies in the identification of robust, clinically relevant biomarkers. Tra...
    Speaker: Stewart Neill, MD
    Sponsored By: Affymetrix, Affymetrix
    10
    AUG 30, 2016 | 8:00 AM
    Directed differentiation of induced pluripotent stem cells to hepatic stellate cells
    Directed differentiation of induced pluripotent stem cells to...
    In healthy liver, quiescent hepatic stellate cells (HSCs) participate in the homeostasis of extracellular matrix and store vitamin A. After injury, HSCs activate and participate in the wound-...
    Speaker: Pau Sancho Bru, PhD
    Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
    1
    MAY 26, 2016 | 8:00 AM
    Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA Seq
    Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA...
    DATE:  May 26, 2016TIME:  8am pacific time, 11am eastern timeJoin us live and learn about a breakthrough in TCR sequencing using single-cell analysis.T cells recognize spe...
    Speaker: Mike Stubbington, PhD , Tapio Lonnberg, PhD
    Sponsored By: Standard BioTools, Standard BioTools
    8
    MAY 11, 2016 | 1:30 PM
    C.E. CREDITS
    Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor Composition
    Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor...
    Human breast tumors have been shown to exhibit extensive inter- and intra-tumor heterogeneity. While recent advances in genomic technologies have allowed us to deconvolute this heterogeneity,...
    Speaker: Ioannis (Jiannis) Ragoussis, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2016
    3
     
     
  • MAY 11, 2016 | 12:00 PM
    Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
    Assembly and Analysis of Non-model Organism Transcriptomes Using...
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
    Speaker: Matthew Keyser, MS
    Presented at: Genetics and Genomics Virtual Event Series 2016
    2
    MAY 11, 2016 | 10:30 AM
    Whole Genome? The Future of High-Quality Genomes & Transcriptomes
    Whole Genome? The Future of High-Quality Genomes & Transcriptomes
    New approaches to generate high-quality representations of human genomes and transcriptomes are now becoming available. In contrast to short-read “Whole-Genome” re-sequencing meth...
    Speaker: Jonas Korlach, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2016
    2
    FEB 02, 2016 | 9:00 AM
    Arrays or RNA-Seq? Choosing the right tool for the job
    Arrays or RNA-Seq? Choosing the right tool for the job
    DATE: February 2nd, 2016 TIME:  9am pacific time, 12pm eastern time What is the most appropriate technology to empower your research?   Next generation sequencing (NGS) for RN...
    Speaker: Sridar Chittur, PhD, MBA , Yesim Gökmen-Polar, PhD
    Sponsored By: Affymetrix, Affymetrix
    11 3
    NOV 11, 2015 | 12:00 PM
    DNASTAR Software for Accurate Variant Detection and Validation in Targeted Gene Panel Data Sets
    DNASTAR Software for Accurate Variant Detection and Validation...
    DNASTAR offers an integrated suite of software for accurate assembly, alignment, and analysis of sequence data from all major next-generation sequencing platforms, supporting key workflows in...
    Speaker: Matthew Keyser, MS
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2015
    0
    OCT 01, 2015 | 9:00 AM
    RNA-editing in melanoma - Case for a sensitive analysis and interpretation platform for the resolution of a diverse molecular process and likely pathogenic variants
    RNA-editing in melanoma - Case for a sensitive analysis and interpretation...
    Of special interest in a clinical setting is the identification and interpretation of somatic variants from the DNA of a tumor/normal matched pair. Studies have shown that a large proportion...
    Speaker: Anika Joecker, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
    2
     
     
  • SEP 30, 2015 | 1:30 PM
    Role of microRNA-mRNA interactions in Endometrioid Endometrial Carcinoma, a "Sample to Insight" biological exploration
    Role of microRNA-mRNA interactions in Endometrioid Endometrial...
    Endometrial adenoarcinoma is a common cause of gynecological cancer death in Europe and North America. The most dominant subtype, Endometrioid Endometrial Cancer (EEC) accounts for >80% of...
    Speaker: Jean-Noel Billaud, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
    2
    SEP 30, 2015 | 6:00 AM
    Comparative genome and transcriptome analysis of small cell numbers
    Comparative genome and transcriptome analysis of small cell numbers
    The genome determines changes of the transcription profile upon environmental changes and finally determines how a cell reacts. A comparative genome and transcriptome analysis of the same sam...
    Speaker: Christian Korfhage, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2015
    2
    SEP 03, 2015 | 3:00 PM
    Next-Generation Sequencing for Diagnosis and Surveillance of Emerging Infections
    Next-Generation Sequencing for Diagnosis and Surveillance of Emerging...
    Next-generation sequencing (NGS) technologies are powerful approaches for diagnosis and surveillance of emerging infections. Unbiased metagenomic NGS can detect the full spectrum of pathogen...
    Speaker: Charles Chiu, MD, PhD
    Presented at: Microbiology Virtual Event Series 2015
    2
    SEP 02, 2015 | 12:00 PM
    DNASTAR Software for Assembly and Analysis of Microbial Genomes
    DNASTAR Software for Assembly and Analysis of Microbial Genomes
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data for key NGS workflows, including microbial genome assembly. The DNASTAR assembly software is...
    Speaker: Matthew Keyser, MS
    Presented at: Microbiology Virtual Event Series 2015
    3
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