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    Transcriptomics

    Transcriptomics: is the study of the transcriptome-the complete set of RNA transcripts that are produced by the genome, under specific circumstances or in a specific cell-using high-throughput methods, such as microarray analysis.

    Webinars

    • MAY 10, 2017 | 6:00 AM
      Developing bioinformatics approaches to understand the functional consequences of gene expression variability
      Developing bioinformatics approaches to understand the functional...
      When studying the transcriptome, most of our inferences revolve around changes in average expression. However, more recent examples have demonstrated that analysis of the variability of gene...
      Speaker: Jessica C. Mar, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2017
      4
      APR 13, 2017 | 9:00 AM
      Keynote Presentation - DNA Standards and Bioinformatics Benchmarks for Metagenomics
      Keynote Presentation - DNA Standards and Bioinformatics Benchmarks...
      Genomics and metagenomics have become ubiquitous research efforts.  Here we will show details of the development of physical, computational, and even space-based standards for metagenomi...
      Speaker: Christopher Mason, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2017
      2
      APR 12, 2017 | 10:30 AM
      Prediction of enzalutamide sensitivity in triple negative breast cancer
      Prediction of enzalutamide sensitivity in triple negative breast...
      A recent clinical trial of the AR inhibitor enzalutamide in patients with TNBC included an exploratory endpoint using RNA sequencing to identify a genomic signature of patients likely to resp...
      Speaker: Joel Parker, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2017
      Sponsored By: NanoString Technologies
      2
      MAR 21, 2017 | 10:00 AM
      WEBINAR: Application of combined RNA in situ hybridization and multiplex immunohistochemistry to unravel tumor heterogeneity in prostate cancer
      WEBINAR: Application of combined RNA in situ hybridization and...
      DATE: March 21, 2017TIME: 10:00am PT, 1:00pm ETSponsored By:      Prostate cancer is a complex disease with multiple tumors originating independent...
      Speaker: Nallasivam Palanisamy, PhD , Courtney Anderson, PhD
      Sponsored By: Novus Biologicals a Bio-Techne Brand
      20 9
      FEB 22, 2017 | 1:30 PM
      Integrating genomics platforms and data in Biobanks
      Integrating genomics platforms and data in Biobanks
      Biobanks are a powerful resource in the advancement of precision medicine, and integrating large scale genomics data across Biobank cohorts offer opportunities to further enhance and expedite...
      Speaker: Sami Amr, PhD
      Presented at: Precision Medicine Virtual Event Series 2017
      2
      FEB 22, 2017 | 6:00 AM
      Mate-pair next generation sequencing as a powerful clinical tool for the characterization of cancer
      Mate-pair next generation sequencing as a powerful clinical tool...
      Recent advances in DNA sequencing have now made it possible to characterize genomes, transcriptomes and even methylomes which is transforming both basic research and clinical practice. Whole...
      Speaker: David Smith, PhD
      Presented at: Precision Medicine Virtual Event Series 2017
      4
      DEC 14, 2016 | 9:00 AM
      Beyond Sequencing: Population Analysis in an Era of Mass Spectrometry Proteomics
      Beyond Sequencing: Population Analysis in an Era of Mass Spectrometry...
      DATE: December 14, 2016TIME: 9:00 AM PT, 12:00 PM ETMicroarrays and nucleotide sequencers have become commonplace tools in current research, yet until now, equivalent technologies for p...
      Speaker: Evan Williams, PhD
      Sponsored By: SCIEX, SCIEX
      25
      NOV 17, 2016 | 3:00 AM
      Genetic variability of ps-iPSC and related blood and fibroblasts - somatic mutations
      Genetic variability of ps-iPSC and related blood and fibroblasts...
      The generation of induced pluripotent stem cells (iPSCs) from adult easily accessible somatic tissues was introduced ten years ago. This technology has revolutionized our opportunities to stu...
      Speaker: KEYNOTE: Silke Rickert-Sperling, PhD
      Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
      8 1
      NOV 16, 2016 | 8:00 AM
      The important role of lncRNAs in breast cancer
      The important role of lncRNAs in breast cancer
      DATE:  November 16, 2016 TIME:  8:00am PT, 11:00am ET  Breast cancer is the most commonly diagnosed cancer in women and is the second leading cause of cancer death among wo...
      Speaker: Rebecca DeVaux, PhD , Alfredo Hidalgo-Miranda, PhD
      Sponsored By: Affymetrix, Affymetrix
      8
      NOV 04, 2016 | 10:00 AM
      Applying a multi-omics approach to tumor biomarker discovery - case studies
      Applying a multi-omics approach to tumor biomarker discovery -...
      DATE:  November 4, 2016 TIME:  10:00am PT, 1:00pm ET How do you develop clinically relevant biomarkers? Systematic tumor profiling with multi-omics tools and rapid analytical...
      Speaker: Antonia Sepulveda, MD, PhD , Yang Yang, PhD , Tamara Lotan, MD
      Sponsored By: Affymetrix, Affymetrix
      10 1
      NOV 03, 2016 | 6:00 AM
      Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
      Mutation Detection Simplified: From Liquid Biopsy in clinical...
      Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
      Speaker: Gerd Michel, PhD , Lou Welebob
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
      5
      OCT 19, 2016 | 9:00 AM
      Controlling RNA-Seq Experiments Using Spike-In RNA Variants
      Controlling RNA-Seq Experiments Using Spike-In RNA Variants
      DATE: October 19, 2016 TIME:  9:00 AM PT, 12:00 PM ET, 6:00 PM CEST    Hardly anyone would run an RNA gel without a ladder, but transcriptomes are mostly sequenced without ...
      Speaker: Lukas Paul, PhD
      Sponsored By: Lexogen, Lexogen
      7 2
      OCT 18, 2016 | 1:00 PM
      Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative Medicine Models of Brain Diseases
      Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative...
      Induced pluripotent stem cells derived from patient cells have emerged as complementary tools to study human neurological disorders.  Neurxstem Inc has generated human iPSC-derived synth...
      Speaker: Rene Anand, PhD
      Presented at: SyncD³ - Where drug discovery & development meet
      0
      OCT 06, 2016 | 10:30 AM
      Precision Genomics and Precision Medicine for Immuno-Oncology
      Precision Genomics and Precision Medicine for Immuno-Oncology
      Tumors often evade immune destruction by adapting and circumventing immune checkpoints to create resistance.  This adaptive immunity can be reversed to stimulate the endogenous immune re...
      Speaker: Erin Newburn, MS, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      0
      OCT 06, 2016 | 7:30 AM
      Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes Reveals Cellular Heterogeneity in Colorectal Cancer
      Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes...
      Intra-tumor heterogeneity is a major obstacle to cancer treatment. Existing single-cell studies of intra-tumor heterogeneity have largely focused on DNA mutations; functional heterogeneity is...
      Speaker: Shyam Prabhakar, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      2
      OCT 05, 2016 | 10:30 AM
      Comparative genetic and transcriptome analyses of Hepatocellular Carcinoma and Endometrioid Endometrial Carcinoma highlight common molecular and biological processes
      Comparative genetic and transcriptome analyses of Hepatocellular...
      Hepatocellular Carcinoma (HCC) and Endometrioid Endometrial Carcinoma (EEC) are two lethal diseases of public health importance worldwide. Understanding the mechanisms of tumor progression in...
      Speaker: Jean-Noel Billaud, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      0
      OCT 05, 2016 | 6:00 AM
      Unique molecular indices (UMI) and their application in detecting novel gene fusions and gene expression and genetic variation
      Unique molecular indices (UMI) and their application in detecting...
      Tumor heterogeneity has been known for a while but quantifying heterogeneity is still a challenge.  NGS is the method of choice in the analysis of tumor heterogeneity, however, there are...
      Speaker: Samuel Rulli, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
      3
      OCT 04, 2016 | 8:00 AM
      Overcoming the Clinical Sample Bottleneck for Expression Studies
      Overcoming the Clinical Sample Bottleneck for Expression Studies
      DATE:  October 4, 2016 TIME:  8:00am PT, 11:00am ET Extracting robust expression data from clinical samples represents a unique opportunity to find actionable biomarkers. But it...
      Speaker: Mark Manary, MD , Sean Diehl, PhD
      Sponsored By: Affymetrix, Affymetrix
      4
      SEP 29, 2016 | 10:00 AM
      Advancing Personalized Medicine through whole-genome profiling
      Advancing Personalized Medicine through whole-genome profiling
      DATE:  September 29, 2016 TIME:  10:00am PT, 1:00pm ET One of the challenges with personalized medicine lies in the identification of robust, clinically relevant biomarkers. Tra...
      Speaker: Stewart Neill, MD
      Sponsored By: Affymetrix, Affymetrix
      10
      AUG 30, 2016 | 8:00 AM
      Directed differentiation of induced pluripotent stem cells to hepatic stellate cells
      Directed differentiation of induced pluripotent stem cells to...
      In healthy liver, quiescent hepatic stellate cells (HSCs) participate in the homeostasis of extracellular matrix and store vitamin A. After injury, HSCs activate and participate in the wound-...
      Speaker: Pau Sancho Bru, PhD
      Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
      1
      MAY 26, 2016 | 8:00 AM
      Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA Seq
      Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA...
      DATE:  May 26, 2016TIME:  8am pacific time, 11am eastern timeJoin us live and learn about a breakthrough in TCR sequencing using single-cell analysis.T cells recognize spe...
      Speaker: Mike Stubbington, PhD , Tapio Lonnberg, PhD
      Sponsored By: Standard BioTools, Standard BioTools
      8
      MAY 11, 2016 | 1:30 PM
      C.E. CREDITS
      Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor Composition
      Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor...
      Human breast tumors have been shown to exhibit extensive inter- and intra-tumor heterogeneity. While recent advances in genomic technologies have allowed us to deconvolute this heterogeneity,...
      Speaker: Ioannis (Jiannis) Ragoussis, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2016
      3
      MAY 11, 2016 | 12:00 PM
      Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
      Assembly and Analysis of Non-model Organism Transcriptomes Using...
      DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
      Speaker: Matthew Keyser, MS
      Presented at: Genetics and Genomics Virtual Event Series 2016
      2
      MAY 11, 2016 | 10:30 AM
      Whole Genome? The Future of High-Quality Genomes & Transcriptomes
      Whole Genome? The Future of High-Quality Genomes & Transcriptomes
      New approaches to generate high-quality representations of human genomes and transcriptomes are now becoming available. In contrast to short-read “Whole-Genome” re-sequencing meth...
      Speaker: Jonas Korlach, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2016
      2
    MAY 10, 2017 | 6:00 AM
    Developing bioinformatics approaches to understand the functional consequences of gene expression variability
    Developing bioinformatics approaches to understand the functional...
    When studying the transcriptome, most of our inferences revolve around changes in average expression. However, more recent examples have demonstrated that analysis of the variability of gene...
    Speaker: Jessica C. Mar, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2017
    4
    APR 13, 2017 | 9:00 AM
    Keynote Presentation - DNA Standards and Bioinformatics Benchmarks for Metagenomics
    Keynote Presentation - DNA Standards and Bioinformatics Benchmarks...
    Genomics and metagenomics have become ubiquitous research efforts.  Here we will show details of the development of physical, computational, and even space-based standards for metagenomi...
    Speaker: Christopher Mason, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2017
    2
    APR 12, 2017 | 10:30 AM
    Prediction of enzalutamide sensitivity in triple negative breast cancer
    Prediction of enzalutamide sensitivity in triple negative breast...
    A recent clinical trial of the AR inhibitor enzalutamide in patients with TNBC included an exploratory endpoint using RNA sequencing to identify a genomic signature of patients likely to resp...
    Speaker: Joel Parker, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2017
    Sponsored By: NanoString Technologies
    2
    MAR 21, 2017 | 10:00 AM
    WEBINAR: Application of combined RNA in situ hybridization and multiplex immunohistochemistry to unravel tumor heterogeneity in prostate cancer
    WEBINAR: Application of combined RNA in situ hybridization and...
    DATE: March 21, 2017TIME: 10:00am PT, 1:00pm ETSponsored By:      Prostate cancer is a complex disease with multiple tumors originating independent...
    Speaker: Nallasivam Palanisamy, PhD , Courtney Anderson, PhD
    Sponsored By: Novus Biologicals a Bio-Techne Brand
    20 9
    FEB 22, 2017 | 1:30 PM
    Integrating genomics platforms and data in Biobanks
    Integrating genomics platforms and data in Biobanks
    Biobanks are a powerful resource in the advancement of precision medicine, and integrating large scale genomics data across Biobank cohorts offer opportunities to further enhance and expedite...
    Speaker: Sami Amr, PhD
    Presented at: Precision Medicine Virtual Event Series 2017
    2
     
     
  • FEB 22, 2017 | 6:00 AM
    Mate-pair next generation sequencing as a powerful clinical tool for the characterization of cancer
    Mate-pair next generation sequencing as a powerful clinical tool...
    Recent advances in DNA sequencing have now made it possible to characterize genomes, transcriptomes and even methylomes which is transforming both basic research and clinical practice. Whole...
    Speaker: David Smith, PhD
    Presented at: Precision Medicine Virtual Event Series 2017
    4
    DEC 14, 2016 | 9:00 AM
    Beyond Sequencing: Population Analysis in an Era of Mass Spectrometry Proteomics
    Beyond Sequencing: Population Analysis in an Era of Mass Spectrometry...
    DATE: December 14, 2016TIME: 9:00 AM PT, 12:00 PM ETMicroarrays and nucleotide sequencers have become commonplace tools in current research, yet until now, equivalent technologies for p...
    Speaker: Evan Williams, PhD
    Sponsored By: SCIEX, SCIEX
    25
    NOV 17, 2016 | 3:00 AM
    Genetic variability of ps-iPSC and related blood and fibroblasts - somatic mutations
    Genetic variability of ps-iPSC and related blood and fibroblasts...
    The generation of induced pluripotent stem cells (iPSCs) from adult easily accessible somatic tissues was introduced ten years ago. This technology has revolutionized our opportunities to stu...
    Speaker: KEYNOTE: Silke Rickert-Sperling, PhD
    Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
    8 1
    NOV 16, 2016 | 8:00 AM
    The important role of lncRNAs in breast cancer
    The important role of lncRNAs in breast cancer
    DATE:  November 16, 2016 TIME:  8:00am PT, 11:00am ET  Breast cancer is the most commonly diagnosed cancer in women and is the second leading cause of cancer death among wo...
    Speaker: Rebecca DeVaux, PhD , Alfredo Hidalgo-Miranda, PhD
    Sponsored By: Affymetrix, Affymetrix
    8
    NOV 04, 2016 | 10:00 AM
    Applying a multi-omics approach to tumor biomarker discovery - case studies
    Applying a multi-omics approach to tumor biomarker discovery -...
    DATE:  November 4, 2016 TIME:  10:00am PT, 1:00pm ET How do you develop clinically relevant biomarkers? Systematic tumor profiling with multi-omics tools and rapid analytical...
    Speaker: Antonia Sepulveda, MD, PhD , Yang Yang, PhD , Tamara Lotan, MD
    Sponsored By: Affymetrix, Affymetrix
    10 1
     
     
  • NOV 03, 2016 | 6:00 AM
    Mutation Detection Simplified: From Liquid Biopsy in clinical oncology to the detection of Drug Resistance Associated Mutations in virology
    Mutation Detection Simplified: From Liquid Biopsy in clinical...
    Sanger sequencing and polymerase chain reaction (PCR) methods have been the standard molecular methods in clinical diagnostics for decades.  Next-Generation Sequencing (NGS) technology r...
    Speaker: Gerd Michel, PhD , Lou Welebob
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2016
    5
    OCT 19, 2016 | 9:00 AM
    Controlling RNA-Seq Experiments Using Spike-In RNA Variants
    Controlling RNA-Seq Experiments Using Spike-In RNA Variants
    DATE: October 19, 2016 TIME:  9:00 AM PT, 12:00 PM ET, 6:00 PM CEST    Hardly anyone would run an RNA gel without a ladder, but transcriptomes are mostly sequenced without ...
    Speaker: Lukas Paul, PhD
    Sponsored By: Lexogen, Lexogen
    7 2
    OCT 18, 2016 | 1:00 PM
    Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative Medicine Models of Brain Diseases
    Human Neural Organoids: "NexGen" Predictive and Personalized Regenerative...
    Induced pluripotent stem cells derived from patient cells have emerged as complementary tools to study human neurological disorders.  Neurxstem Inc has generated human iPSC-derived synth...
    Speaker: Rene Anand, PhD
    Presented at: SyncD³ - Where drug discovery & development meet
    0
    OCT 06, 2016 | 10:30 AM
    Precision Genomics and Precision Medicine for Immuno-Oncology
    Precision Genomics and Precision Medicine for Immuno-Oncology
    Tumors often evade immune destruction by adapting and circumventing immune checkpoints to create resistance.  This adaptive immunity can be reversed to stimulate the endogenous immune re...
    Speaker: Erin Newburn, MS, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    0
    OCT 06, 2016 | 7:30 AM
    Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes Reveals Cellular Heterogeneity in Colorectal Cancer
    Keynote Speaker: Reference Component Analysis of Single Cell Transcriptomes...
    Intra-tumor heterogeneity is a major obstacle to cancer treatment. Existing single-cell studies of intra-tumor heterogeneity have largely focused on DNA mutations; functional heterogeneity is...
    Speaker: Shyam Prabhakar, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    2
     
     
  • OCT 05, 2016 | 10:30 AM
    Comparative genetic and transcriptome analyses of Hepatocellular Carcinoma and Endometrioid Endometrial Carcinoma highlight common molecular and biological processes
    Comparative genetic and transcriptome analyses of Hepatocellular...
    Hepatocellular Carcinoma (HCC) and Endometrioid Endometrial Carcinoma (EEC) are two lethal diseases of public health importance worldwide. Understanding the mechanisms of tumor progression in...
    Speaker: Jean-Noel Billaud, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    0
    OCT 05, 2016 | 6:00 AM
    Unique molecular indices (UMI) and their application in detecting novel gene fusions and gene expression and genetic variation
    Unique molecular indices (UMI) and their application in detecting...
    Tumor heterogeneity has been known for a while but quantifying heterogeneity is still a challenge.  NGS is the method of choice in the analysis of tumor heterogeneity, however, there are...
    Speaker: Samuel Rulli, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2016
    3
    OCT 04, 2016 | 8:00 AM
    Overcoming the Clinical Sample Bottleneck for Expression Studies
    Overcoming the Clinical Sample Bottleneck for Expression Studies
    DATE:  October 4, 2016 TIME:  8:00am PT, 11:00am ET Extracting robust expression data from clinical samples represents a unique opportunity to find actionable biomarkers. But it...
    Speaker: Mark Manary, MD , Sean Diehl, PhD
    Sponsored By: Affymetrix, Affymetrix
    4
    SEP 29, 2016 | 10:00 AM
    Advancing Personalized Medicine through whole-genome profiling
    Advancing Personalized Medicine through whole-genome profiling
    DATE:  September 29, 2016 TIME:  10:00am PT, 1:00pm ET One of the challenges with personalized medicine lies in the identification of robust, clinically relevant biomarkers. Tra...
    Speaker: Stewart Neill, MD
    Sponsored By: Affymetrix, Affymetrix
    10
    AUG 30, 2016 | 8:00 AM
    Directed differentiation of induced pluripotent stem cells to hepatic stellate cells
    Directed differentiation of induced pluripotent stem cells to...
    In healthy liver, quiescent hepatic stellate cells (HSCs) participate in the homeostasis of extracellular matrix and store vitamin A. After injury, HSCs activate and participate in the wound-...
    Speaker: Pau Sancho Bru, PhD
    Presented at: 4th Annual 24 Hours of Stem Cellsâ„¢ virtual event
    1
     
     
  • MAY 26, 2016 | 8:00 AM
    Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA Seq
    Linking T Cell Clonotype to Phenotype with TCR Single-Cell RNA...
    DATE:  May 26, 2016TIME:  8am pacific time, 11am eastern timeJoin us live and learn about a breakthrough in TCR sequencing using single-cell analysis.T cells recognize spe...
    Speaker: Mike Stubbington, PhD , Tapio Lonnberg, PhD
    Sponsored By: Standard BioTools, Standard BioTools
    8
    MAY 11, 2016 | 1:30 PM
    C.E. CREDITS
    Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor Composition
    Microfluidic Single Cell Exome-seq and RNA-seq analysis of Tumor...
    Human breast tumors have been shown to exhibit extensive inter- and intra-tumor heterogeneity. While recent advances in genomic technologies have allowed us to deconvolute this heterogeneity,...
    Speaker: Ioannis (Jiannis) Ragoussis, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2016
    3
    MAY 11, 2016 | 12:00 PM
    Assembly and Analysis of Non-model Organism Transcriptomes Using DNASTAR Software
    Assembly and Analysis of Non-model Organism Transcriptomes Using...
    DNASTAR offers an integrated suite of software for accurate assembly and analysis of sequence data from all major next-generation sequencing platforms supporting key workflows including de no...
    Speaker: Matthew Keyser, MS
    Presented at: Genetics and Genomics Virtual Event Series 2016
    2
    MAY 11, 2016 | 10:30 AM
    Whole Genome? The Future of High-Quality Genomes & Transcriptomes
    Whole Genome? The Future of High-Quality Genomes & Transcriptomes
    New approaches to generate high-quality representations of human genomes and transcriptomes are now becoming available. In contrast to short-read “Whole-Genome” re-sequencing meth...
    Speaker: Jonas Korlach, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2016
    2
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