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    Bioinformatics

    Bioinformatics: an interdisciplinary field that develops methods and software tools for understanding biological data. As an interdisciplinary field of science, bioinformatics combines computer science, statistics, mathematics, and engineering to analyze and interpret biological data.

    Webinars

    • SEP 08, 2021 | 12:00 AM
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
      The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
      Speaker: Ramy K. Aziz, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      1
      SEP 08, 2021 | 12:00 AM
      High-precision Microbial Diagnostics From Sequencing Data
      High-precision Microbial Diagnostics From Sequencing Data
      Genetic Molecular Surveillance is a key component of a modern public health toolkit. This talk will detail the molecular microbial make up of urban environments. It will discuss how these en...
      Speaker: David C. Danko, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      3
      AUG 25, 2021 | 7:00 AM
      Automation-aided targeted genotyping with Allegro for maize breeding: a case study of QTL analysis with MAGIC mapping populations
      Automation-aided targeted genotyping with Allegro for maize breeding:...
      Date: August 25, 2021 Time: 7:00am PDT DreamPrep NGS is a complete solution that combines the Fluent® Automation Workstation, the Infinite® F Nano+ plate reader and Tecan Genomics&rsq...
      Speaker: Dr. Davide Scaglione , Leonardo Caproni, PhD
      Sponsored By: Tecan
      4
      AUG 25, 2021 | 12:00 AM
      Learning Electrical Connectomes of Neuropsychiatric Disorders and Behaviors
      Learning Electrical Connectomes of Neuropsychiatric Disorders...
      Targeted stimulation of the brain has the potential to treat mental illnesses but designing an appropriate protocol requires a multitude of choices. I will describe an approach to help desig...
      Speaker: David Carlson, PhD
      Presented at: Neuroscience Virtual Event Series 2021
      1
      JUL 15, 2021 | 9:00 AM
      Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
      Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
      Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
      Speaker: Brian Hilbush, Ph.D.
      Sponsored By: Veranome Biosystems
      9
      JUN 22, 2021 | 10:00 AM
      Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
      Can AI powered diagnostics revolutionize antimicrobial stewardship?...
      Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
      Speaker: Dr. Arne Materna
      Sponsored By: OpGen, Inc.
      7
      APR 27, 2021 | 8:00 AM
      Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and Confirmation
      Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and...
      Date: April 27, 2021 Time: 08:00am (PDT) The versatility of CRISPR-Cas9 has expanded the available toolset of gene editing systems for life scientists. However, these experiments require det...
      Speaker: Matthew Poling, PhD
      Sponsored By: Thermo Fisher Scientific
      15
      APR 22, 2021 | 6:00 AM
      Panel Presentation: Powering the precision in "precision medicine" - The role of curated data, databases and knowledge: Does a gold standard exist?
      Panel Presentation: Powering the precision in "precision medicine"...
      As NGS panels grow, test interpretation becomes more complex and time-consuming / With the explosion of NGS data, the need for consolidated databases with reliable and transparent curation a...
      Speaker: Dominic John , Simon Forbes, PhD , Shawn Bauer , Lisa Barrow-Laing
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: QIAGEN
      2
      APR 22, 2021 | 12:00 AM
      An Introduction to Resources Facilitating Cancer Variant Interpretation
      An Introduction to Resources Facilitating Cancer Variant Interpretation
      Learning Objectives: 1. Identify different kinds of genomic resources 2. Learn to apply the features available in genomic resources to cancer variant interpretation 3. Describe the importanc...
      Speaker: Beth Pitel, M.S., CG(ASCP)CM
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 21, 2021 | 9:00 AM
      Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
      Supporting Biomarker Discovery One Cell at a Time - Single cell...
      Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
      Speaker: Joseph Pearson, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: QIAGEN
      1
      APR 21, 2021 | 7:30 AM
      Panel Presentation: Next-Generation Sequencing in the Global Response to the COVID-19 Pandemic
      Panel Presentation: Next-Generation Sequencing in the Global Response...
      The SARS-CoV-2 pandemic is challenging our health care systems and has profoundly impacted our society. Due to the poor global public health response, SARS-CoV-2 has developed many variants....
      Speaker: Eric Allen, MBA, M. Eng. Bioengineering , Michael Oberholzer, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 21, 2021 | 12:00 AM
      Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive Aneuploidy Analysis
      Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive...
      NGS Bioinformatics software has come of age. Our workflows need software solutions that don’t only carry out the correct calculations to give the correct results reliably and unambiguo...
      Speaker: Matthew C. Forman, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
      Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
      Speaker: Fairlie Reese, PhD Student
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Cell type-specific vulnerability to traumatic brain injury
      Cell type-specific vulnerability to traumatic brain injury
      Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
      Speaker: Araks Martirosyan, Ph.D.
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      C.E. CREDITS
      Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
      Low error rate long-reads enable the identification of long variant...
      Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
      Speaker: Derek Bickhart, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 07, 2021 | 12:00 AM
      A Chinese hamster transcription start site atlas that enables targeted editing of CHO cells
      A Chinese hamster transcription start site atlas that enables...
      Chinese hamster ovary (CHO) cells are the most widely used cells for producing biopharmaceuticals. Engineering gene expression in CHO is key to improving drug quality and affordability. Howe...
      Speaker: Isaac Shamie
      Presented at: Bioprocessing Virtual Event Series 2021
      1
      MAR 24, 2021 | 12:00 AM
      Terpenes: Understanding the Genetics Behind Taste and Smell
      Terpenes: Understanding the Genetics Behind Taste and Smell
      Terpenes are a broad class of chemicals that are found throughout the Cannabis plant that produce the unique aroma and taste of your favorite variety. Cannabis breeders have been selecting f...
      Speaker: Christopher Pauli
      Presented at: Cannabis Sciences Virtual Event Series 2021
      3
      FEB 24, 2021 | 3:00 PM
      Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
      Supporting Biomarker Discovery One Cell at a Time - Single cell...
      Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
      Speaker: Leif Schauser, PhD , Joseph Pearson, PhD
      Presented at: Drug Discovery & Development Virtual Event Series 2021
      Sponsored By: QIAGEN
      2
      FEB 24, 2021 | 10:00 AM
      Biosafety Enclosures and the Automated Lab: Steps for Success
      Biosafety Enclosures and the Automated Lab: Steps for Success
      DATE: February 24, 2021 TIME: 10am PST Automated lab instruments such as liquid handlers and cell sorters are increasingly common in all types of laboratories, driving fast results for labor...
      Speaker: David Wasescha , Simon Fogarty
      Sponsored By: Labconco
      15
      FEB 24, 2021 | 7:00 AM
      DeepCLIP: Predicting the effect of mutations on protein-RNA binding with deep learning
      DeepCLIP: Predicting the effect of mutations on protein-RNA binding...
      Date: February 24, 2021 Time: 7:00am (PST) Nucleotide variants can cause functional changes by altering protein–RNA binding in various ways that are not easy to predict. This can affec...
      Speaker: Thomas Doktor, PhD.
      Sponsored By: GenScript
      12
      FEB 10, 2021 | 12:00 AM
      The Experimental Design Assistant: an interactive web-based tool to provide bespoke feedback on experimental plans for in vivo studies
      The Experimental Design Assistant: an interactive web-based tool...
      There is growing concern about the reliability of biomedical research results. Poor experimental design, inappropriate analysis methods and incomplete reporting have all contributed to incon...
      Speaker: Dr. Esther Pearl
      Presented at: Laboratory Animal Sciences Virtual Event Series 2021
      2
      FEB 10, 2021 | 12:00 AM
      How to improve rodent aseptic surgery at your facility using household products: Press N' Seal and Reynolds Wrap Foil
      How to improve rodent aseptic surgery at your facility using household...
      Learning Objectives: 1. Methods on how to aseptically use foil (Reynolds Wrap) in rodent surgery 2. Methods on how aseptically use cling film (Press N' Seal) in rodent surgery 3. Long-te...
      Speaker: Raphael A. Malbrue, DVM, MS, CertAqV
      Presented at: Laboratory Animal Sciences Virtual Event Series 2021
      5
      FEB 10, 2021 | 12:00 AM
      Refining Pain Management for Laboratory Mice
      Refining Pain Management for Laboratory Mice
      Pain management includes the choice of analgesia agents, their dose, administration method, duration and frequency of treatment, and a pain-monitoring scheme for each individual animal. Insu...
      Speaker: Paulin Jirkof, PhD
      Presented at: Laboratory Animal Sciences Virtual Event Series 2021
      4
      DEC 03, 2020 | 4:30 PM
      An Iterative Approach to Structure-based in silico to in vivo Development of Combinatorial Anti-SARS-CoV-2 Therapy
      An Iterative Approach to Structure-based in silico to in vivo...
      This drug development program is designed to create a family of broad-spectrum, pan-coronaviral drugs that respectively inhibit multiple key enzymes required for viral replication. By target...
      Speaker: Garth Ehrlich, PhD, FAAAS
      Presented at: Coronavirus Series
      5
    SEP 08, 2021 | 12:00 AM
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
    The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
    Speaker: Ramy K. Aziz, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    1
    SEP 08, 2021 | 12:00 AM
    High-precision Microbial Diagnostics From Sequencing Data
    High-precision Microbial Diagnostics From Sequencing Data
    Genetic Molecular Surveillance is a key component of a modern public health toolkit. This talk will detail the molecular microbial make up of urban environments. It will discuss how these en...
    Speaker: David C. Danko, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    3
    AUG 25, 2021 | 7:00 AM
    Automation-aided targeted genotyping with Allegro for maize breeding: a case study of QTL analysis with MAGIC mapping populations
    Automation-aided targeted genotyping with Allegro for maize breeding:...
    Date: August 25, 2021 Time: 7:00am PDT DreamPrep NGS is a complete solution that combines the Fluent® Automation Workstation, the Infinite® F Nano+ plate reader and Tecan Genomics&rsq...
    Speaker: Dr. Davide Scaglione , Leonardo Caproni, PhD
    Sponsored By: Tecan
    4
    AUG 25, 2021 | 12:00 AM
    Learning Electrical Connectomes of Neuropsychiatric Disorders and Behaviors
    Learning Electrical Connectomes of Neuropsychiatric Disorders...
    Targeted stimulation of the brain has the potential to treat mental illnesses but designing an appropriate protocol requires a multitude of choices. I will describe an approach to help desig...
    Speaker: David Carlson, PhD
    Presented at: Neuroscience Virtual Event Series 2021
    1
    JUL 15, 2021 | 9:00 AM
    Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
    Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
    Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
    Speaker: Brian Hilbush, Ph.D.
    Sponsored By: Veranome Biosystems
    9
     
     
  • JUN 22, 2021 | 10:00 AM
    Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
    Can AI powered diagnostics revolutionize antimicrobial stewardship?...
    Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
    Speaker: Dr. Arne Materna
    Sponsored By: OpGen, Inc.
    7
    APR 27, 2021 | 8:00 AM
    Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and Confirmation
    Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and...
    Date: April 27, 2021 Time: 08:00am (PDT) The versatility of CRISPR-Cas9 has expanded the available toolset of gene editing systems for life scientists. However, these experiments require det...
    Speaker: Matthew Poling, PhD
    Sponsored By: Thermo Fisher Scientific
    15
    APR 22, 2021 | 6:00 AM
    Panel Presentation: Powering the precision in "precision medicine" - The role of curated data, databases and knowledge: Does a gold standard exist?
    Panel Presentation: Powering the precision in "precision medicine"...
    As NGS panels grow, test interpretation becomes more complex and time-consuming / With the explosion of NGS data, the need for consolidated databases with reliable and transparent curation a...
    Speaker: Dominic John , Simon Forbes, PhD , Shawn Bauer , Lisa Barrow-Laing
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: QIAGEN
    2
    APR 22, 2021 | 12:00 AM
    An Introduction to Resources Facilitating Cancer Variant Interpretation
    An Introduction to Resources Facilitating Cancer Variant Interpretation
    Learning Objectives: 1. Identify different kinds of genomic resources 2. Learn to apply the features available in genomic resources to cancer variant interpretation 3. Describe the importanc...
    Speaker: Beth Pitel, M.S., CG(ASCP)CM
    Presented at: Genetics Week Virtual Event Series 2021
    2
    APR 21, 2021 | 9:00 AM
    Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
    Supporting Biomarker Discovery One Cell at a Time - Single cell...
    Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
    Speaker: Joseph Pearson, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: QIAGEN
    1
     
     
  • APR 21, 2021 | 7:30 AM
    Panel Presentation: Next-Generation Sequencing in the Global Response to the COVID-19 Pandemic
    Panel Presentation: Next-Generation Sequencing in the Global Response...
    The SARS-CoV-2 pandemic is challenging our health care systems and has profoundly impacted our society. Due to the poor global public health response, SARS-CoV-2 has developed many variants....
    Speaker: Eric Allen, MBA, M. Eng. Bioengineering , Michael Oberholzer, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
    APR 21, 2021 | 12:00 AM
    Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive Aneuploidy Analysis
    Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive...
    NGS Bioinformatics software has come of age. Our workflows need software solutions that don’t only carry out the correct calculations to give the correct results reliably and unambiguo...
    Speaker: Matthew C. Forman, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
    Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
    Speaker: Fairlie Reese, PhD Student
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Cell type-specific vulnerability to traumatic brain injury
    Cell type-specific vulnerability to traumatic brain injury
    Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
    Speaker: Araks Martirosyan, Ph.D.
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    C.E. CREDITS
    Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
    Low error rate long-reads enable the identification of long variant...
    Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
    Speaker: Derek Bickhart, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
     
     
  • APR 07, 2021 | 12:00 AM
    A Chinese hamster transcription start site atlas that enables targeted editing of CHO cells
    A Chinese hamster transcription start site atlas that enables...
    Chinese hamster ovary (CHO) cells are the most widely used cells for producing biopharmaceuticals. Engineering gene expression in CHO is key to improving drug quality and affordability. Howe...
    Speaker: Isaac Shamie
    Presented at: Bioprocessing Virtual Event Series 2021
    1
    MAR 24, 2021 | 12:00 AM
    Terpenes: Understanding the Genetics Behind Taste and Smell
    Terpenes: Understanding the Genetics Behind Taste and Smell
    Terpenes are a broad class of chemicals that are found throughout the Cannabis plant that produce the unique aroma and taste of your favorite variety. Cannabis breeders have been selecting f...
    Speaker: Christopher Pauli
    Presented at: Cannabis Sciences Virtual Event Series 2021
    3
    FEB 24, 2021 | 3:00 PM
    Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
    Supporting Biomarker Discovery One Cell at a Time - Single cell...
    Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
    Speaker: Leif Schauser, PhD , Joseph Pearson, PhD
    Presented at: Drug Discovery & Development Virtual Event Series 2021
    Sponsored By: QIAGEN
    2
    FEB 24, 2021 | 10:00 AM
    Biosafety Enclosures and the Automated Lab: Steps for Success
    Biosafety Enclosures and the Automated Lab: Steps for Success
    DATE: February 24, 2021 TIME: 10am PST Automated lab instruments such as liquid handlers and cell sorters are increasingly common in all types of laboratories, driving fast results for labor...
    Speaker: David Wasescha , Simon Fogarty
    Sponsored By: Labconco
    15
    FEB 24, 2021 | 7:00 AM
    DeepCLIP: Predicting the effect of mutations on protein-RNA binding with deep learning
    DeepCLIP: Predicting the effect of mutations on protein-RNA binding...
    Date: February 24, 2021 Time: 7:00am (PST) Nucleotide variants can cause functional changes by altering protein–RNA binding in various ways that are not easy to predict. This can affec...
    Speaker: Thomas Doktor, PhD.
    Sponsored By: GenScript
    12
     
     
  • FEB 10, 2021 | 12:00 AM
    The Experimental Design Assistant: an interactive web-based tool to provide bespoke feedback on experimental plans for in vivo studies
    The Experimental Design Assistant: an interactive web-based tool...
    There is growing concern about the reliability of biomedical research results. Poor experimental design, inappropriate analysis methods and incomplete reporting have all contributed to incon...
    Speaker: Dr. Esther Pearl
    Presented at: Laboratory Animal Sciences Virtual Event Series 2021
    2
    FEB 10, 2021 | 12:00 AM
    How to improve rodent aseptic surgery at your facility using household products: Press N' Seal and Reynolds Wrap Foil
    How to improve rodent aseptic surgery at your facility using household...
    Learning Objectives: 1. Methods on how to aseptically use foil (Reynolds Wrap) in rodent surgery 2. Methods on how aseptically use cling film (Press N' Seal) in rodent surgery 3. Long-te...
    Speaker: Raphael A. Malbrue, DVM, MS, CertAqV
    Presented at: Laboratory Animal Sciences Virtual Event Series 2021
    5
    FEB 10, 2021 | 12:00 AM
    Refining Pain Management for Laboratory Mice
    Refining Pain Management for Laboratory Mice
    Pain management includes the choice of analgesia agents, their dose, administration method, duration and frequency of treatment, and a pain-monitoring scheme for each individual animal. Insu...
    Speaker: Paulin Jirkof, PhD
    Presented at: Laboratory Animal Sciences Virtual Event Series 2021
    4
    DEC 03, 2020 | 4:30 PM
    An Iterative Approach to Structure-based in silico to in vivo Development of Combinatorial Anti-SARS-CoV-2 Therapy
    An Iterative Approach to Structure-based in silico to in vivo...
    This drug development program is designed to create a family of broad-spectrum, pan-coronaviral drugs that respectively inhibit multiple key enzymes required for viral replication. By target...
    Speaker: Garth Ehrlich, PhD, FAAAS
    Presented at: Coronavirus Series
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