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    Bioinformatics

    Bioinformatics: an interdisciplinary field that develops methods and software tools for understanding biological data. As an interdisciplinary field of science, bioinformatics combines computer science, statistics, mathematics, and engineering to analyze and interpret biological data.

    Webinars

    • DEC 08, 2021 | 9:00 AM
      The MAD7â„¢ nuclease in plant editing: overcoming CRISPR bottlenecks with MAD TiGER
      The MAD7â„¢ nuclease in plant editing: overcoming CRISPR bottlenecks...
      Date: December 9, 2021 Time: 9:00am (PDT), 12:00am (EDT) CRISPR editing has revolutionized plant breeding, and the MAD7 CRISPR nuclease developed by InscriptaTM is democratizing access to CR...
      Speaker: Gabino Sanchez , Ben Mijts
      Sponsored By: Inscripta
      5
      NOV 15, 2021 | 6:00 AM
      Fully automated RNA library preparation for sequencing respiratory viruses
      Fully automated RNA library preparation for sequencing respiratory...
      Date: November 15, 2021 Time: 6:00am (PDT), 9:00am (EDT) Targeted sequencing of respiratory viruses’ genomes is important to identify novel viral variants. Compared to amplicon sequenc...
      Speaker: Dr. Tomasz Zemojtel , Randy Pares
      Sponsored By: Beckman Coulter Life Sciences
      6
      NOV 04, 2021 | 11:00 AM
      Quality control processes for precise and accurate microbial next-generation sequencing (NGS)
      Quality control processes for precise and accurate microbial next-generation...
      Date: November 4, 2021 Time: 11:00am (PDT), 1:00pm (EDT) Rapid, reliable, and accurate identification of an infective organisms has a profound impact on treatment management and clinical out...
      Speaker: Jose Alexander, MD, ABMM, ABAIM, FCCM, CIC, ASCP, BCMAS
      Sponsored By: MicroGenDX
      5
      NOV 04, 2021 | 7:00 AM
      Proper Controls for the Bigfoot Spectral Cytometer: Beads Are Not Cells; But Are They Close?
      Proper Controls for the Bigfoot Spectral Cytometer: Beads Are...
      Date: November 4, 2021 Time: 7:00am (PDT), 10:00am (EDT), 1:00pm (CEST) The availability of spectral cell sorters has been highly anticipated by core directors and investigators alike. Howev...
      Speaker: David Adams, Ms. ED.
      Sponsored By: Thermo Fisher Scientific
      4
      OCT 26, 2021 | 8:00 AM
      Maximizing tumor microenvironment analysis for TILs from limited patient samples
      Maximizing tumor microenvironment analysis for TILs from limited...
      Date: October 26, 2021 Time: 8:00am (PDT), 11:00am (EDT) A complex interaction among heterogenous immune and tumor cells within the tumorous tissue not only influences tumor progression, but...
      Speaker: Dr. César Evaristo
      Sponsored By: Miltenyi Biotec
      5
      OCT 13, 2021 | 4:30 PM
      Delivering Insights by Analyzing Metagenomic NGS Data
      Delivering Insights by Analyzing Metagenomic NGS Data
      In this session we will use a set of reads enriched for viral sequences and sequences from wastewater treatment plants. Specifically the aim is to assemble whole SARS-CoV-2 genomes from such...
      Speaker: Patrick Ettenhuber, PhD
      Presented at: Coronavirus Series
      Sponsored By: QIAGEN
      1
      OCT 13, 2021 | 3:00 PM
      Accelerating SARS-CoV-2 Genomic Surveillance with High-throughput NGS
      Accelerating SARS-CoV-2 Genomic Surveillance with High-throughput...
      Since late 2020, several prominent SARS-CoV-2 variants of concern have emerged, harboring specific mutations which increase viral transmissibility Delta variant) and which appear to reduce t...
      Speaker: James Caffrey, PhD, MBA
      Presented at: Coronavirus Series
      Sponsored By: QIAGEN
      1
      SEP 29, 2021 | 11:00 AM
      Automating culture and high-content imaging of 3D organoids for in vitro assessment of compound effects
      Automating culture and high-content imaging of 3D organoids for...
      Date: Septembr 29, 2021 Time: 11:00am (PDT), 2:00pm (EDT) 3D cell models are becoming increasingly popular for studying complex biological effects, tissue functionality, and diseases. While...
      Speaker: Oksana Sirenko, PhD
      Sponsored By: Molecular Devices
      9
      SEP 09, 2021 | 7:00 AM
      Maximize your variant knowledge using the Human Gene Mutation Database (HGMD®) Professional
      Maximize your variant knowledge using the Human Gene Mutation...
      Date: September 9, 2021 Time: 7:00am (PDT), 10:00am (EDT) Founded and maintained by the Institute of Medical Genetics at Cardiff University in 1996, HGMD attempts to collate all known, publi...
      Speaker: Dr. Ruth Burton
      Sponsored By: QIAGEN
      3
      SEP 08, 2021 | 12:00 AM
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
      The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
      Speaker: Ramy K. Aziz, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      1
      SEP 08, 2021 | 12:00 AM
      High-precision Microbial Diagnostics From Sequencing Data
      High-precision Microbial Diagnostics From Sequencing Data
      Genetic Molecular Surveillance is a key component of a modern public health toolkit. This talk will detail the molecular microbial make up of urban environments. It will discuss how these en...
      Speaker: David C. Danko, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      3
      AUG 25, 2021 | 7:00 AM
      Automation-aided targeted genotyping with Allegro for maize breeding: a case study of QTL analysis with MAGIC mapping populations
      Automation-aided targeted genotyping with Allegro for maize breeding:...
      Date: August 25, 2021 Time: 7:00am PDT DreamPrep NGS is a complete solution that combines the Fluent® Automation Workstation, the Infinite® F Nano+ plate reader and Tecan Genomics&rsq...
      Speaker: Dr. Davide Scaglione , Leonardo Caproni, PhD
      Sponsored By: Tecan
      4
      AUG 25, 2021 | 12:00 AM
      Learning Electrical Connectomes of Neuropsychiatric Disorders and Behaviors
      Learning Electrical Connectomes of Neuropsychiatric Disorders...
      Targeted stimulation of the brain has the potential to treat mental illnesses but designing an appropriate protocol requires a multitude of choices. I will describe an approach to help desig...
      Speaker: David Carlson, PhD
      Presented at: Neuroscience Virtual Event Series 2021
      1
      JUL 15, 2021 | 9:00 AM
      Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
      Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
      Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
      Speaker: Brian Hilbush, Ph.D.
      Sponsored By: Veranome Biosystems
      9
      JUN 22, 2021 | 10:00 AM
      Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
      Can AI powered diagnostics revolutionize antimicrobial stewardship?...
      Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
      Speaker: Dr. Arne Materna
      Sponsored By: OpGen, Inc.
      7
      APR 27, 2021 | 8:00 AM
      Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and Confirmation
      Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and...
      Date: April 27, 2021 Time: 08:00am (PDT) The versatility of CRISPR-Cas9 has expanded the available toolset of gene editing systems for life scientists. However, these experiments require det...
      Speaker: Matthew Poling, PhD
      Sponsored By: Thermo Fisher Scientific
      15
      APR 22, 2021 | 6:00 AM
      Panel Presentation: Powering the precision in "precision medicine" - The role of curated data, databases and knowledge: Does a gold standard exist?
      Panel Presentation: Powering the precision in "precision medicine"...
      As NGS panels grow, test interpretation becomes more complex and time-consuming / With the explosion of NGS data, the need for consolidated databases with reliable and transparent curation a...
      Speaker: Dominic John , Simon Forbes, PhD , Shawn Bauer , Lisa Barrow-Laing
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: QIAGEN
      2
      APR 22, 2021 | 12:00 AM
      An Introduction to Resources Facilitating Cancer Variant Interpretation
      An Introduction to Resources Facilitating Cancer Variant Interpretation
      Learning Objectives: 1. Identify different kinds of genomic resources 2. Learn to apply the features available in genomic resources to cancer variant interpretation 3. Describe the importanc...
      Speaker: Beth Pitel, M.S., CG(ASCP)CM
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 21, 2021 | 9:00 AM
      Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
      Supporting Biomarker Discovery One Cell at a Time - Single cell...
      Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
      Speaker: Joseph Pearson, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: QIAGEN
      1
      APR 21, 2021 | 7:30 AM
      Panel Presentation: Next-Generation Sequencing in the Global Response to the COVID-19 Pandemic
      Panel Presentation: Next-Generation Sequencing in the Global Response...
      The SARS-CoV-2 pandemic is challenging our health care systems and has profoundly impacted our society. Due to the poor global public health response, SARS-CoV-2 has developed many variants....
      Speaker: Eric Allen, MBA, M. Eng. Bioengineering , Michael Oberholzer, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 21, 2021 | 12:00 AM
      Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive Aneuploidy Analysis
      Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive...
      NGS Bioinformatics software has come of age. Our workflows need software solutions that don’t only carry out the correct calculations to give the correct results reliably and unambiguo...
      Speaker: Matthew C. Forman, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      Cell type-specific vulnerability to traumatic brain injury
      Cell type-specific vulnerability to traumatic brain injury
      Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
      Speaker: Araks Martirosyan, Ph.D.
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 12:00 AM
      C.E. CREDITS
      Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
      Low error rate long-reads enable the identification of long variant...
      Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
      Speaker: Derek Bickhart, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 20, 2021 | 12:00 AM
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
      Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
      Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
      Speaker: Fairlie Reese, PhD Student
      Presented at: Genetics Week Virtual Event Series 2021
      1
    DEC 08, 2021 | 9:00 AM
    The MAD7â„¢ nuclease in plant editing: overcoming CRISPR bottlenecks with MAD TiGER
    The MAD7â„¢ nuclease in plant editing: overcoming CRISPR bottlenecks...
    Date: December 9, 2021 Time: 9:00am (PDT), 12:00am (EDT) CRISPR editing has revolutionized plant breeding, and the MAD7 CRISPR nuclease developed by InscriptaTM is democratizing access to CR...
    Speaker: Gabino Sanchez , Ben Mijts
    Sponsored By: Inscripta
    5
    NOV 15, 2021 | 6:00 AM
    Fully automated RNA library preparation for sequencing respiratory viruses
    Fully automated RNA library preparation for sequencing respiratory...
    Date: November 15, 2021 Time: 6:00am (PDT), 9:00am (EDT) Targeted sequencing of respiratory viruses’ genomes is important to identify novel viral variants. Compared to amplicon sequenc...
    Speaker: Dr. Tomasz Zemojtel , Randy Pares
    Sponsored By: Beckman Coulter Life Sciences
    6
    NOV 04, 2021 | 11:00 AM
    Quality control processes for precise and accurate microbial next-generation sequencing (NGS)
    Quality control processes for precise and accurate microbial next-generation...
    Date: November 4, 2021 Time: 11:00am (PDT), 1:00pm (EDT) Rapid, reliable, and accurate identification of an infective organisms has a profound impact on treatment management and clinical out...
    Speaker: Jose Alexander, MD, ABMM, ABAIM, FCCM, CIC, ASCP, BCMAS
    Sponsored By: MicroGenDX
    5
    NOV 04, 2021 | 7:00 AM
    Proper Controls for the Bigfoot Spectral Cytometer: Beads Are Not Cells; But Are They Close?
    Proper Controls for the Bigfoot Spectral Cytometer: Beads Are...
    Date: November 4, 2021 Time: 7:00am (PDT), 10:00am (EDT), 1:00pm (CEST) The availability of spectral cell sorters has been highly anticipated by core directors and investigators alike. Howev...
    Speaker: David Adams, Ms. ED.
    Sponsored By: Thermo Fisher Scientific
    4
    OCT 26, 2021 | 8:00 AM
    Maximizing tumor microenvironment analysis for TILs from limited patient samples
    Maximizing tumor microenvironment analysis for TILs from limited...
    Date: October 26, 2021 Time: 8:00am (PDT), 11:00am (EDT) A complex interaction among heterogenous immune and tumor cells within the tumorous tissue not only influences tumor progression, but...
    Speaker: Dr. César Evaristo
    Sponsored By: Miltenyi Biotec
    5
     
     
  • OCT 13, 2021 | 4:30 PM
    Delivering Insights by Analyzing Metagenomic NGS Data
    Delivering Insights by Analyzing Metagenomic NGS Data
    In this session we will use a set of reads enriched for viral sequences and sequences from wastewater treatment plants. Specifically the aim is to assemble whole SARS-CoV-2 genomes from such...
    Speaker: Patrick Ettenhuber, PhD
    Presented at: Coronavirus Series
    Sponsored By: QIAGEN
    1
    OCT 13, 2021 | 3:00 PM
    Accelerating SARS-CoV-2 Genomic Surveillance with High-throughput NGS
    Accelerating SARS-CoV-2 Genomic Surveillance with High-throughput...
    Since late 2020, several prominent SARS-CoV-2 variants of concern have emerged, harboring specific mutations which increase viral transmissibility Delta variant) and which appear to reduce t...
    Speaker: James Caffrey, PhD, MBA
    Presented at: Coronavirus Series
    Sponsored By: QIAGEN
    1
    SEP 29, 2021 | 11:00 AM
    Automating culture and high-content imaging of 3D organoids for in vitro assessment of compound effects
    Automating culture and high-content imaging of 3D organoids for...
    Date: Septembr 29, 2021 Time: 11:00am (PDT), 2:00pm (EDT) 3D cell models are becoming increasingly popular for studying complex biological effects, tissue functionality, and diseases. While...
    Speaker: Oksana Sirenko, PhD
    Sponsored By: Molecular Devices
    9
    SEP 09, 2021 | 7:00 AM
    Maximize your variant knowledge using the Human Gene Mutation Database (HGMD®) Professional
    Maximize your variant knowledge using the Human Gene Mutation...
    Date: September 9, 2021 Time: 7:00am (PDT), 10:00am (EDT) Founded and maintained by the Institute of Medical Genetics at Cardiff University in 1996, HGMD attempts to collate all known, publi...
    Speaker: Dr. Ruth Burton
    Sponsored By: QIAGEN
    3
    SEP 08, 2021 | 12:00 AM
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
    The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
    Speaker: Ramy K. Aziz, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    1
     
     
  • SEP 08, 2021 | 12:00 AM
    High-precision Microbial Diagnostics From Sequencing Data
    High-precision Microbial Diagnostics From Sequencing Data
    Genetic Molecular Surveillance is a key component of a modern public health toolkit. This talk will detail the molecular microbial make up of urban environments. It will discuss how these en...
    Speaker: David C. Danko, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    3
    AUG 25, 2021 | 7:00 AM
    Automation-aided targeted genotyping with Allegro for maize breeding: a case study of QTL analysis with MAGIC mapping populations
    Automation-aided targeted genotyping with Allegro for maize breeding:...
    Date: August 25, 2021 Time: 7:00am PDT DreamPrep NGS is a complete solution that combines the Fluent® Automation Workstation, the Infinite® F Nano+ plate reader and Tecan Genomics&rsq...
    Speaker: Dr. Davide Scaglione , Leonardo Caproni, PhD
    Sponsored By: Tecan
    4
    AUG 25, 2021 | 12:00 AM
    Learning Electrical Connectomes of Neuropsychiatric Disorders and Behaviors
    Learning Electrical Connectomes of Neuropsychiatric Disorders...
    Targeted stimulation of the brain has the potential to treat mental illnesses but designing an appropriate protocol requires a multitude of choices. I will describe an approach to help desig...
    Speaker: David Carlson, PhD
    Presented at: Neuroscience Virtual Event Series 2021
    1
    JUL 15, 2021 | 9:00 AM
    Veranome Webinar Series:  Highly Multiplexed Analysis of Mouse Neural Tissues
    Veranome Webinar Series: Highly Multiplexed Analysis of Mouse...
    Date: July 15, 2021 Time: 9:00am (PDT), 12:00pm (EDT) The Pisces workflow robust, easy-to-use, end-to-end multi-omics solution for highly multiplexed targeted Spatial RNA analysis. VeranomeB...
    Speaker: Brian Hilbush, Ph.D.
    Sponsored By: Veranome Biosystems
    9
    JUN 22, 2021 | 10:00 AM
    Can AI powered diagnostics revolutionize antimicrobial stewardship? Machine learning based prediction of antimicrobial resistance (AMR) in short and long read sequencing data
    Can AI powered diagnostics revolutionize antimicrobial stewardship?...
    Date: June 22, 2021 Time: 10:00am (PDT), 1:00pm (EDT) Antimicrobial resistance (AMR) has emerged as one of the principal public health problems of the 21st century. It threatens the effectiv...
    Speaker: Dr. Arne Materna
    Sponsored By: OpGen, Inc.
    7
     
     
  • APR 27, 2021 | 8:00 AM
    Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and Confirmation
    Simplified Online Tools for CRISPR-Cas9 Gene Editing Design and...
    Date: April 27, 2021 Time: 08:00am (PDT) The versatility of CRISPR-Cas9 has expanded the available toolset of gene editing systems for life scientists. However, these experiments require det...
    Speaker: Matthew Poling, PhD
    Sponsored By: Thermo Fisher Scientific
    15
    APR 22, 2021 | 6:00 AM
    Panel Presentation: Powering the precision in "precision medicine" - The role of curated data, databases and knowledge: Does a gold standard exist?
    Panel Presentation: Powering the precision in "precision medicine"...
    As NGS panels grow, test interpretation becomes more complex and time-consuming / With the explosion of NGS data, the need for consolidated databases with reliable and transparent curation a...
    Speaker: Dominic John , Simon Forbes, PhD , Shawn Bauer , Lisa Barrow-Laing
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: QIAGEN
    2
    APR 22, 2021 | 12:00 AM
    An Introduction to Resources Facilitating Cancer Variant Interpretation
    An Introduction to Resources Facilitating Cancer Variant Interpretation
    Learning Objectives: 1. Identify different kinds of genomic resources 2. Learn to apply the features available in genomic resources to cancer variant interpretation 3. Describe the importanc...
    Speaker: Beth Pitel, M.S., CG(ASCP)CM
    Presented at: Genetics Week Virtual Event Series 2021
    2
    APR 21, 2021 | 9:00 AM
    Supporting Biomarker Discovery One Cell at a Time - Single cell analysis solutions that drive results and insights
    Supporting Biomarker Discovery One Cell at a Time - Single cell...
    Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize g...
    Speaker: Joseph Pearson, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: QIAGEN
    1
    APR 21, 2021 | 7:30 AM
    Panel Presentation: Next-Generation Sequencing in the Global Response to the COVID-19 Pandemic
    Panel Presentation: Next-Generation Sequencing in the Global Response...
    The SARS-CoV-2 pandemic is challenging our health care systems and has profoundly impacted our society. Due to the poor global public health response, SARS-CoV-2 has developed many variants....
    Speaker: Eric Allen, MBA, M. Eng. Bioengineering , Michael Oberholzer, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
     
     
  • APR 21, 2021 | 12:00 AM
    Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive Aneuploidy Analysis
    Flex Analysis: A Safe, Integrated and Flexible Approach to Non-Invasive...
    NGS Bioinformatics software has come of age. Our workflows need software solutions that don’t only carry out the correct calculations to give the correct results reliably and unambiguo...
    Speaker: Matthew C. Forman, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    Cell type-specific vulnerability to traumatic brain injury
    Cell type-specific vulnerability to traumatic brain injury
    Traumatic brain injury (TBI) is best characterized as brain dysfunction caused by an outside force, usually a violent blow to the head, often occurring as a result of a severe sports injury...
    Speaker: Araks Martirosyan, Ph.D.
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 12:00 AM
    C.E. CREDITS
    Low error rate long-reads enable the identification of long variant haplotypes in metagenome assemblies
    Low error rate long-reads enable the identification of long variant...
    Microbial communities include distinct lineages of closely related organisms which have proved challenging to separate in metagenomic assembly. Challenges include the existence of highly rel...
    Speaker: Derek Bickhart, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
    APR 20, 2021 | 12:00 AM
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq and Single-Cell ATAC-seq in Myogenesis
    Integrative Analysis of Single-Cell Combinatorial Long-Read RNA-seq...
    Learning Objectives: 1. Demonstrate the utility of long-read RNA-sequencing in studying alternative isoforms 2. Define the long-Split-seq approach to profiling the transcriptomes of single-c...
    Speaker: Fairlie Reese, PhD Student
    Presented at: Genetics Week Virtual Event Series 2021
    1
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