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    Bioinformatics

    Bioinformatics: an interdisciplinary field that develops methods and software tools for understanding biological data. As an interdisciplinary field of science, bioinformatics combines computer science, statistics, mathematics, and engineering to analyze and interpret biological data.

    Webinars

    • SEP 28, 2017 | 7:30 AM
      Keynote Presentation: RNA-targeting CRISPR and application to diseases
      Keynote Presentation: RNA-targeting CRISPR and application to...
      I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
      Speaker: Gene Yeo, PhD
      Presented at: Cell Biology Virtual Event Series 2017
      1
      SEP 14, 2017 | 1:30 PM
      Dissecting the ecological and molecular mechanisms underlying the interaction between plant viruses and their insect vectors
      Dissecting the ecological and molecular mechanisms underlying...
      Plant viruses cause significant damage in terms of reduction in quality and quantity of yield in a wide range of crop plants worldwide. The majority of plant viruses are transmitted from one...
      Speaker: Punya Nachappa, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 12:00 PM
      How to deploy a portable lab for the surveillance of emerging infectious diseases
      How to deploy a portable lab for the surveillance of emerging...
      Genome sequencing can be used to discover new pathogens but it can also be used to monitor known ones. This is known as genomic surveillance and it becoming an increasingly important tool in...
      Speaker: Josh Quick
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Oxford Nanopore Technologies
      1
      SEP 14, 2017 | 10:30 AM
      Clinical and Laboratory Studies of Zika Virus Infection
      Clinical and Laboratory Studies of Zika Virus Infection
      An unbiased metagenomic next-generation approach (mNGS) been shown to be useful in the broad identification of pathogens in clinical samples for infectious disease diagnosis, including viruse...
      Speaker: Charles Chiu, MD, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 10:30 AM
      Sex as a Biological Variable in Microbial Pathogenesis
      Sex as a Biological Variable in Microbial Pathogenesis
      Males and females differ in their immunological responses to viral and vaccine antigens, with females typically mounting higher immune responses than males. These sex-based immunological diff...
      Speaker: Sabra L. Klein, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      4
      SEP 14, 2017 | 9:00 AM
      Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
      Development of tools enabling tunable, in situ delivery of therapeutics...
      The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
      Speaker: Nathan Crook, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 7:30 AM
      Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial Drug Resistance
      Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial...
      Quinolones are one the most commonly prescribed classes of antibacterials in the world and are used to treat a broad variety of Gram-negative and Gram-positive bacterial infections in humans....
      Speaker: Neil Osheroff, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 14, 2017 | 6:00 AM
      A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in an unrelated dsRNA virus: taxonomic and evolutionary considerations
      A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in...
      A rapidly growing number of viruses of lower eukaryotes have been reported in the past few decades. These have enhanced our understanding of virus evolution and diversity. Simultaneously, som...
      Speaker: Nobuhiro Suzuki, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3
      SEP 13, 2017 | 1:30 PM
      Integration of the Simplexa C. difficile Direct assay in a two-step algorithm for the laboratory diagnosis of C. difficile
      Integration of the Simplexa C. difficile Direct assay in a two-step...
      Clostridium difficile is a major pathogen responsible for infectious diarrhea in healthcare settings. This presentation will review the data from a study comparing the new Simplexa® C. di...
      Speaker: Dr. James Snyder
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Diasorin
      2
      SEP 13, 2017 | 1:30 PM
      The escalating challenges of antimicrobial resistance and the efforts to conquer these threats
      The escalating challenges of antimicrobial resistance and the...
      The global threat of antimicrobial resistance has been recognized by the World Health Organization, the United Nations and many other expert bodies. The burden of resistant pathogens is immen...
      Speaker: Glenn Tillotson, PhD, FIDSA, FCCP
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3 1
      SEP 13, 2017 | 12:00 PM
      High Resolution Outbreak Tracing and Resistance Detection using Whole Genome Sequencing in the case of a Mycobacterium tuberculosis Outbreak
      High Resolution Outbreak Tracing and Resistance Detection using...
      Background: In March 2014, a molecular cluster of five multidrug resistant Mycobacterium tuberculosis was detected by the Austrian National Reference Laboratory. An investigation was initiate...
      Speaker: Winnie Ridderberg, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 13, 2017 | 10:30 AM
      The Science of Farm to Table: Sourdough Bread as a Microcosm of the Global Food Crisis
      The Science of Farm to Table: Sourdough Bread as a Microcosm of...
      Rob Dunn has recently published Never Out of Season, the story of the homogenization of our global food supply and the risks that homogenization poses. He will build on the stories from this...
      Speaker: Rob Dunn, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 13, 2017 | 9:00 AM
      How Biomarker Testing Shapes Immunotherapy
      How Biomarker Testing Shapes Immunotherapy
      The immune system is complex and dynamic, focused on defending the body from a host of pathogens ranging from viruses to cancer. A number of different mechanisms have evolved that help the bo...
      Speaker: Condie Carmack, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Vela Diagnostics
      1
      SEP 13, 2017 | 9:00 AM
      Insights into virus replication: the role of co-opted host proteins and lipids
      Insights into virus replication: the role of co-opted host proteins...
      Virus – host interactions are currently among the most intensively studied research areas due to the promising new antiviral approaches emerging from these studies. Indeed, RNA viruses,...
      Speaker: Peter L. Nagy, MD., PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3
      SEP 13, 2017 | 7:30 AM
      Keynote Presentation: Using phage to select for evolution of reduced virulence in pathogenic bacteria
      Keynote Presentation: Using phage to select for evolution of reduced...
      Increasing prevalence and severity of multi-drug-resistant (MDR) bacterial infections has necessitated novel antibacterial strategies.  Ideally, new approaches would target bacterial pat...
      Speaker: Paul Turner, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 13, 2017 | 6:00 AM
      Next-generation probiotics targeting C. difficile infection
      Next-generation probiotics targeting C. difficile infection
      Adjunct probiotic therapy has the potential to decrease Clostridium difficile disease incidence and severity. After screening several potential probiotic bacteria for intrinsic resistance to...
      Speaker: Jennifer Spinler, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 13, 2017 | 6:00 AM
      Microbe Wars: The Rise of CRISPR Immunity and Technology
      Microbe Wars: The Rise of CRISPR Immunity and Technology
      Prokaryotes have long been at war with bacteriophage. The evolutionary pressure of this struggle has led both sides to develop sophisticated defenses. Notably, CRISPR-Cas systems evolved to l...
      Speaker: Megan Hochstrasser, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      4 1
      SEP 12, 2017 | 8:00 AM
      Addressing the antibody reproducibility crisis: A panel  discussion with key scientific leaders
      Addressing the antibody reproducibility crisis: A panel discussion...
      DATE: September 12, 2017TIME: 8:00am PT, 11:00am ETEvery year, millions of dollars are wasted on poorly characterized and performing antibodies.  Key researchers in the antibody co...
      Speaker: Aled Edwards, PhD , Matt Baker , Anita Bandrowski, PhD , Paul Wallace, PhD , John Rogers, PhD , Christoph Hergersberg, PhD
      Presented at: Protein and Cell Analysis Education Series
      Sponsored By: Thermo Fisher Scientific
      5 1
      JUN 28, 2017 | 9:00 AM
      WEBINAR: Integration of 3´ mRNA-Seq and iCLIP to derive high-resolution RNA maps for the regulation of alternative polyadenylation
      WEBINAR: Integration of 3´ mRNA-Seq and iCLIP to derive high-resolution...
      DATE: June 28, 2017TIME: 9:00AM PDT, 12:00PM EDT, 6:00PM CESTMany RNA binding proteins (RBPs) regulate the selection of alternative polyA sites. To understand their regulatory principle...
      Speaker: Jernej Ule, PhD , Gregor Rot, PhD
      Sponsored By: Lexogen
      5
      JUN 14, 2017 | 6:00 AM
      WEBINAR: Accelerated Data Workflows for Biomarker Discovery in Metabolomics: Clinical Research Applications in Cystic Fibrosis Research
      WEBINAR: Accelerated Data Workflows for Biomarker Discovery in...
      DATE: June 14, 2017TIME: 6:00am PT, 9:00am ET, 3:00pm CETComprehensive metabolite profiling (i.e., metabolomics) offers a holistic approach for understanding the phenotype of an organis...
      Speaker: Philip Britz-McKibbin
      Sponsored By: Agilent
      4
      JUN 08, 2017 | 10:00 AM
      WEBINAR: Analysis of the transcriptome of carriers of pathological variants in PSEN1, PSEN2 and APP that cause Alzheimer's Disease
      WEBINAR: Analysis of the transcriptome of carriers of pathological...
      DATE: June 8, 2017TIME: 10:00AM PDT, 1:00PM EDT, 7:00PM CESTAlzheimer’s Disease (AD) is the result of complex interactions between risk factors that cause pleiotropic changes in m...
      Speaker: Oscar Harari, PhD
      Sponsored By: Lexogen
      6
      MAY 30, 2017 | 9:00 AM
      Protein and Cell Analysis Education Series featuring the Antibody Validation Forum
      Protein and Cell Analysis Education Series featuring the Antibody...
      Addressing the antibody reproducibility crisis: A panel discussion with key scientific leaders  Reproducibility and antibody validation standards are two significant challenges f...
      Speaker: Aled Edwards, PhD , Matt Baker , Anita Bandrowski, PhD , Paul Wallace, PhD , John Rogers, PhD , Christoph Hergersberg, PhD
      Presented at: Protein and Cell Analysis Education Series
      15
      MAY 25, 2017 | 12:00 PM
      Automated Pathology Robotics and Informatics Across the Top
      Automated Pathology Robotics and Informatics Across the Top
      Diseases like cancer have complex tissue morphology requiring microscopic examination.  Typically this involves 2D examination through a microscope by a pathologist, a slow and manual pr...
      Speaker: Todd Huffman
      Presented at: Lab Automation Virtual Event Series 2017
      2
      MAY 25, 2017 | 10:30 AM
      Open Targets Platform: mining gene and disease evidence for improved drug target selection.
      Open Targets Platform: mining gene and disease evidence for improved...
      Open Targets is a public-private partnership made up of four global leading institutions in the fields of pharmaceuticals, bioinformatics and genomics, GSK, EMBL-EBI, the Wellcome Trust Sange...
      Speaker: Denise Carvalho-Silva
      Presented at: Lab Automation Virtual Event Series 2017
      1
    SEP 28, 2017 | 7:30 AM
    Keynote Presentation: RNA-targeting CRISPR and application to diseases
    Keynote Presentation: RNA-targeting CRISPR and application to...
    I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
    Speaker: Gene Yeo, PhD
    Presented at: Cell Biology Virtual Event Series 2017
    1
    SEP 14, 2017 | 1:30 PM
    Dissecting the ecological and molecular mechanisms underlying the interaction between plant viruses and their insect vectors
    Dissecting the ecological and molecular mechanisms underlying...
    Plant viruses cause significant damage in terms of reduction in quality and quantity of yield in a wide range of crop plants worldwide. The majority of plant viruses are transmitted from one...
    Speaker: Punya Nachappa, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 12:00 PM
    How to deploy a portable lab for the surveillance of emerging infectious diseases
    How to deploy a portable lab for the surveillance of emerging...
    Genome sequencing can be used to discover new pathogens but it can also be used to monitor known ones. This is known as genomic surveillance and it becoming an increasingly important tool in...
    Speaker: Josh Quick
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Oxford Nanopore Technologies
    1
    SEP 14, 2017 | 10:30 AM
    Clinical and Laboratory Studies of Zika Virus Infection
    Clinical and Laboratory Studies of Zika Virus Infection
    An unbiased metagenomic next-generation approach (mNGS) been shown to be useful in the broad identification of pathogens in clinical samples for infectious disease diagnosis, including viruse...
    Speaker: Charles Chiu, MD, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 10:30 AM
    Sex as a Biological Variable in Microbial Pathogenesis
    Sex as a Biological Variable in Microbial Pathogenesis
    Males and females differ in their immunological responses to viral and vaccine antigens, with females typically mounting higher immune responses than males. These sex-based immunological diff...
    Speaker: Sabra L. Klein, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    4
     
     
  • SEP 14, 2017 | 9:00 AM
    Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
    Development of tools enabling tunable, in situ delivery of therapeutics...
    The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
    Speaker: Nathan Crook, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 7:30 AM
    Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial Drug Resistance
    Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial...
    Quinolones are one the most commonly prescribed classes of antibacterials in the world and are used to treat a broad variety of Gram-negative and Gram-positive bacterial infections in humans....
    Speaker: Neil Osheroff, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
    SEP 14, 2017 | 6:00 AM
    A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in an unrelated dsRNA virus: taxonomic and evolutionary considerations
    A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in...
    A rapidly growing number of viruses of lower eukaryotes have been reported in the past few decades. These have enhanced our understanding of virus evolution and diversity. Simultaneously, som...
    Speaker: Nobuhiro Suzuki, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3
    SEP 13, 2017 | 1:30 PM
    Integration of the Simplexa C. difficile Direct assay in a two-step algorithm for the laboratory diagnosis of C. difficile
    Integration of the Simplexa C. difficile Direct assay in a two-step...
    Clostridium difficile is a major pathogen responsible for infectious diarrhea in healthcare settings. This presentation will review the data from a study comparing the new Simplexa® C. di...
    Speaker: Dr. James Snyder
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Diasorin
    2
    SEP 13, 2017 | 1:30 PM
    The escalating challenges of antimicrobial resistance and the efforts to conquer these threats
    The escalating challenges of antimicrobial resistance and the...
    The global threat of antimicrobial resistance has been recognized by the World Health Organization, the United Nations and many other expert bodies. The burden of resistant pathogens is immen...
    Speaker: Glenn Tillotson, PhD, FIDSA, FCCP
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3 1
     
     
  • SEP 13, 2017 | 12:00 PM
    High Resolution Outbreak Tracing and Resistance Detection using Whole Genome Sequencing in the case of a Mycobacterium tuberculosis Outbreak
    High Resolution Outbreak Tracing and Resistance Detection using...
    Background: In March 2014, a molecular cluster of five multidrug resistant Mycobacterium tuberculosis was detected by the Austrian National Reference Laboratory. An investigation was initiate...
    Speaker: Winnie Ridderberg, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
    SEP 13, 2017 | 10:30 AM
    The Science of Farm to Table: Sourdough Bread as a Microcosm of the Global Food Crisis
    The Science of Farm to Table: Sourdough Bread as a Microcosm of...
    Rob Dunn has recently published Never Out of Season, the story of the homogenization of our global food supply and the risks that homogenization poses. He will build on the stories from this...
    Speaker: Rob Dunn, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 13, 2017 | 9:00 AM
    How Biomarker Testing Shapes Immunotherapy
    How Biomarker Testing Shapes Immunotherapy
    The immune system is complex and dynamic, focused on defending the body from a host of pathogens ranging from viruses to cancer. A number of different mechanisms have evolved that help the bo...
    Speaker: Condie Carmack, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Vela Diagnostics
    1
    SEP 13, 2017 | 9:00 AM
    Insights into virus replication: the role of co-opted host proteins and lipids
    Insights into virus replication: the role of co-opted host proteins...
    Virus – host interactions are currently among the most intensively studied research areas due to the promising new antiviral approaches emerging from these studies. Indeed, RNA viruses,...
    Speaker: Peter L. Nagy, MD., PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3
    SEP 13, 2017 | 7:30 AM
    Keynote Presentation: Using phage to select for evolution of reduced virulence in pathogenic bacteria
    Keynote Presentation: Using phage to select for evolution of reduced...
    Increasing prevalence and severity of multi-drug-resistant (MDR) bacterial infections has necessitated novel antibacterial strategies.  Ideally, new approaches would target bacterial pat...
    Speaker: Paul Turner, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
     
     
  • SEP 13, 2017 | 6:00 AM
    Next-generation probiotics targeting C. difficile infection
    Next-generation probiotics targeting C. difficile infection
    Adjunct probiotic therapy has the potential to decrease Clostridium difficile disease incidence and severity. After screening several potential probiotic bacteria for intrinsic resistance to...
    Speaker: Jennifer Spinler, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
    SEP 13, 2017 | 6:00 AM
    Microbe Wars: The Rise of CRISPR Immunity and Technology
    Microbe Wars: The Rise of CRISPR Immunity and Technology
    Prokaryotes have long been at war with bacteriophage. The evolutionary pressure of this struggle has led both sides to develop sophisticated defenses. Notably, CRISPR-Cas systems evolved to l...
    Speaker: Megan Hochstrasser, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    4 1
    SEP 12, 2017 | 8:00 AM
    Addressing the antibody reproducibility crisis: A panel  discussion with key scientific leaders
    Addressing the antibody reproducibility crisis: A panel discussion...
    DATE: September 12, 2017TIME: 8:00am PT, 11:00am ETEvery year, millions of dollars are wasted on poorly characterized and performing antibodies.  Key researchers in the antibody co...
    Speaker: Aled Edwards, PhD , Matt Baker , Anita Bandrowski, PhD , Paul Wallace, PhD , John Rogers, PhD , Christoph Hergersberg, PhD
    Presented at: Protein and Cell Analysis Education Series
    Sponsored By: Thermo Fisher Scientific
    5 1
    JUN 28, 2017 | 9:00 AM
    WEBINAR: Integration of 3´ mRNA-Seq and iCLIP to derive high-resolution RNA maps for the regulation of alternative polyadenylation
    WEBINAR: Integration of 3´ mRNA-Seq and iCLIP to derive high-resolution...
    DATE: June 28, 2017TIME: 9:00AM PDT, 12:00PM EDT, 6:00PM CESTMany RNA binding proteins (RBPs) regulate the selection of alternative polyA sites. To understand their regulatory principle...
    Speaker: Jernej Ule, PhD , Gregor Rot, PhD
    Sponsored By: Lexogen
    5
    JUN 14, 2017 | 6:00 AM
    WEBINAR: Accelerated Data Workflows for Biomarker Discovery in Metabolomics: Clinical Research Applications in Cystic Fibrosis Research
    WEBINAR: Accelerated Data Workflows for Biomarker Discovery in...
    DATE: June 14, 2017TIME: 6:00am PT, 9:00am ET, 3:00pm CETComprehensive metabolite profiling (i.e., metabolomics) offers a holistic approach for understanding the phenotype of an organis...
    Speaker: Philip Britz-McKibbin
    Sponsored By: Agilent
    4
     
     
  • JUN 08, 2017 | 10:00 AM
    WEBINAR: Analysis of the transcriptome of carriers of pathological variants in PSEN1, PSEN2 and APP that cause Alzheimer's Disease
    WEBINAR: Analysis of the transcriptome of carriers of pathological...
    DATE: June 8, 2017TIME: 10:00AM PDT, 1:00PM EDT, 7:00PM CESTAlzheimer’s Disease (AD) is the result of complex interactions between risk factors that cause pleiotropic changes in m...
    Speaker: Oscar Harari, PhD
    Sponsored By: Lexogen
    6
    MAY 30, 2017 | 9:00 AM
    Protein and Cell Analysis Education Series featuring the Antibody Validation Forum
    Protein and Cell Analysis Education Series featuring the Antibody...
    Addressing the antibody reproducibility crisis: A panel discussion with key scientific leaders  Reproducibility and antibody validation standards are two significant challenges f...
    Speaker: Aled Edwards, PhD , Matt Baker , Anita Bandrowski, PhD , Paul Wallace, PhD , John Rogers, PhD , Christoph Hergersberg, PhD
    Presented at: Protein and Cell Analysis Education Series
    15
    MAY 25, 2017 | 12:00 PM
    Automated Pathology Robotics and Informatics Across the Top
    Automated Pathology Robotics and Informatics Across the Top
    Diseases like cancer have complex tissue morphology requiring microscopic examination.  Typically this involves 2D examination through a microscope by a pathologist, a slow and manual pr...
    Speaker: Todd Huffman
    Presented at: Lab Automation Virtual Event Series 2017
    2
    MAY 25, 2017 | 10:30 AM
    Open Targets Platform: mining gene and disease evidence for improved drug target selection.
    Open Targets Platform: mining gene and disease evidence for improved...
    Open Targets is a public-private partnership made up of four global leading institutions in the fields of pharmaceuticals, bioinformatics and genomics, GSK, EMBL-EBI, the Wellcome Trust Sange...
    Speaker: Denise Carvalho-Silva
    Presented at: Lab Automation Virtual Event Series 2017
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