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    Bioinformatics

    Bioinformatics: an interdisciplinary field that develops methods and software tools for understanding biological data. As an interdisciplinary field of science, bioinformatics combines computer science, statistics, mathematics, and engineering to analyze and interpret biological data.

    Webinars

    • JAN 30, 2018 | 9:00 AM
      WEBINAR: Metagenomics and base modifications from long, short, and linked-reads
      WEBINAR: Metagenomics and base modifications from long, short,...
      DATE: January 30, 2018TIME: 9:00AM PST, 12:00PM ESTInfectious disease surveillance and monitoring is critical in settings where disease outbreaks and antibiotic resistance can dramatica...
      Speaker: Christopher Mason, PhD , Shuiquan Tang, PhD
      Sponsored By: Zymo Research
      6 1
      NOV 08, 2017 | 1:30 PM
      Rapid Variant Interpretation and Reporting Using the QIAGEN Knowledgebase and QIAGEN Clinical Insight - Interpret (QCI-I)
      Rapid Variant Interpretation and Reporting Using the QIAGEN Knowledgebase...
      The advent of next generation sequencing has transformed the way we identify mutations with clinical implications. As the compendium of variants expands, gathering the most current and accura...
      Speaker: Jennifer Poitras, PhD
      Presented at: Clinical Diagnostics & Research Virtual Event Series 2017
      1
      NOV 06, 2017 | 8:00 AM
      WEBINAR:  Rapid PGS workflow using next-generation sequencing
      WEBINAR: Rapid PGS workflow using next-generation sequencing
      DATE: November 6, 2017TIME: 08:00am PST, 11:00pm EST, 5:00pm CET Set-up of a PGS platform: the Swiss experienceDr. Murisier’s lab investigated the different technical...
      Speaker: Fabien Murisier, PhD, ESHRE Senior Clinical Embryologist , Luis Alcaraz, PhD, CAP, Certificacion Sanitaria, CEQAS
      Sponsored By: Thermo Fisher Scientific - Ion Torrent
      8
      OCT 26, 2017 | 10:00 AM
      WEBINAR: Where to go from here: next generation clinical mass spectrometry
      WEBINAR: Where to go from here: next generation clinical mass...
      DATE: October 26, 2017TIME: 10:00am PT, 1:00pm ETMass spectrometry has gained tremendous interests in clinical applications in the past decade to serve patients needs.  W...
      Speaker: Victoria Zhang
      10
      OCT 25, 2017 | 6:00 AM
      WEBINAR #3:  Enabling neurological disease research via DNA fragment analysis on the new SeqStudio genetic analyzer
      WEBINAR #3: Enabling neurological disease research via DNA fragment...
      DATE: October 25, 2017TIME: 06:00am PDT, 09:00am EDTThis is the third topic in the webinar series on ‘Sanger Sequencing & Fragment Analysis made easy’.Repetitive DNA...
      Speaker: Gary Latham, PhD
      Sponsored By: Thermo Fisher Scientific
      3
      OCT 12, 2017 | 12:00 PM
      Detection of circulating tumour biomarkers using the FirePlex® Technology Platform
      Detection of circulating tumour biomarkers using the FirePlex®...
      The detection of circulating molecular biomarkers is useful for monitoring pathogenic processes and response to therapeutic intervention1,2. In cancer, genomic and proteomic biomarkers are us...
      Speaker: Daniel Pregibon, PhD
      Presented at: Abcam virtual exhibition: support and products to advance your research
      2
      OCT 12, 2017 | 12:00 PM
      Comprehensive genomic and transcriptomic analysis of acral melanoma: A path towards therapeutic development
      Comprehensive genomic and transcriptomic analysis of acral melanoma:...
      Acral lentiginous melanoma (ALM) is a rare sun-shielded melanoma subtype associated with worse survival than cutaneous melanoma (CM), a more common form of skin cancer linked to exposure to u...
      Speaker: Winnie Liang, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
      1
      OCT 12, 2017 | 12:00 PM
      Detection of circulating tumour biomarkers using the FirePlex® Technology Platform
      Detection of circulating tumour biomarkers using the FirePlex®...
      The detection of circulating molecular biomarkers is useful for monitoring pathogenic processes and response to therapeutic intervention1,2. In cancer, genomic and proteomic biomarkers are us...
      Speaker: Daniel Pregibon, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
      Sponsored By: Abcam
      1
      OCT 12, 2017 | 9:00 AM
      Circulating biomarkers - what matters for the isolation of biomarkers from Liquid Biopsy samples
      Circulating biomarkers - what matters for the isolation of biomarkers...
      The analysis of circulating biomarkers in a patient’s blood holds significant potential for early disease detection and disease monitoring. Circulating DNA is the most commonly studied...
      Speaker: Verena Schramm, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
      Sponsored By: QIAGEN Molecular Diagnostics
      1
      OCT 11, 2017 | 6:00 AM
      A Pan-Cancer view of gene expression in Immuno-Oncology with particular applications in ovarian cancer
      A Pan-Cancer view of gene expression in Immuno-Oncology with particular...
      There has been a great deal of renewed attention in immuno-oncology over the last decade.   Therapies for cancer are being developed, approved, and administered that can either initiate,...
      Speaker: Wendell Jones, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
      2
      SEP 28, 2017 | 7:30 AM
      Keynote Presentation: RNA-targeting CRISPR and application to diseases
      Keynote Presentation: RNA-targeting CRISPR and application to...
      I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
      Speaker: Gene Yeo, PhD
      Presented at: Cell Biology Virtual Event Series 2017
      1
      SEP 14, 2017 | 1:30 PM
      Dissecting the ecological and molecular mechanisms underlying the interaction between plant viruses and their insect vectors
      Dissecting the ecological and molecular mechanisms underlying...
      Plant viruses cause significant damage in terms of reduction in quality and quantity of yield in a wide range of crop plants worldwide. The majority of plant viruses are transmitted from one...
      Speaker: Punya Nachappa, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 12:00 PM
      How to deploy a portable lab for the surveillance of emerging infectious diseases
      How to deploy a portable lab for the surveillance of emerging...
      Genome sequencing can be used to discover new pathogens but it can also be used to monitor known ones. This is known as genomic surveillance and it becoming an increasingly important tool in...
      Speaker: Josh Quick
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Oxford Nanopore Technologies
      1
      SEP 14, 2017 | 10:30 AM
      Clinical and Laboratory Studies of Zika Virus Infection
      Clinical and Laboratory Studies of Zika Virus Infection
      An unbiased metagenomic next-generation approach (mNGS) been shown to be useful in the broad identification of pathogens in clinical samples for infectious disease diagnosis, including viruse...
      Speaker: Charles Chiu, MD, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 10:30 AM
      Sex as a Biological Variable in Microbial Pathogenesis
      Sex as a Biological Variable in Microbial Pathogenesis
      Males and females differ in their immunological responses to viral and vaccine antigens, with females typically mounting higher immune responses than males. These sex-based immunological diff...
      Speaker: Sabra L. Klein, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      4
      SEP 14, 2017 | 9:00 AM
      Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
      Development of tools enabling tunable, in situ delivery of therapeutics...
      The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
      Speaker: Nathan Crook, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 14, 2017 | 7:30 AM
      Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial Drug Resistance
      Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial...
      Quinolones are one the most commonly prescribed classes of antibacterials in the world and are used to treat a broad variety of Gram-negative and Gram-positive bacterial infections in humans....
      Speaker: Neil Osheroff, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 14, 2017 | 6:00 AM
      A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in an unrelated dsRNA virus: taxonomic and evolutionary considerations
      A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in...
      A rapidly growing number of viruses of lower eukaryotes have been reported in the past few decades. These have enhanced our understanding of virus evolution and diversity. Simultaneously, som...
      Speaker: Nobuhiro Suzuki, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3
      SEP 13, 2017 | 1:30 PM
      Integration of the Simplexa C. difficile Direct assay in a two-step algorithm for the laboratory diagnosis of C. difficile
      Integration of the Simplexa C. difficile Direct assay in a two-step...
      Clostridium difficile is a major pathogen responsible for infectious diarrhea in healthcare settings. This presentation will review the data from a study comparing the new Simplexa® C. di...
      Speaker: Dr. James Snyder
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Diasorin
      2
      SEP 13, 2017 | 1:30 PM
      The escalating challenges of antimicrobial resistance and the efforts to conquer these threats
      The escalating challenges of antimicrobial resistance and the...
      The global threat of antimicrobial resistance has been recognized by the World Health Organization, the United Nations and many other expert bodies. The burden of resistant pathogens is immen...
      Speaker: Glenn Tillotson, PhD, FIDSA, FCCP
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3 1
      SEP 13, 2017 | 12:00 PM
      High Resolution Outbreak Tracing and Resistance Detection using Whole Genome Sequencing in the case of a Mycobacterium tuberculosis Outbreak
      High Resolution Outbreak Tracing and Resistance Detection using...
      Background: In March 2014, a molecular cluster of five multidrug resistant Mycobacterium tuberculosis was detected by the Austrian National Reference Laboratory. An investigation was initiate...
      Speaker: Winnie Ridderberg, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      1
      SEP 13, 2017 | 10:30 AM
      The Science of Farm to Table: Sourdough Bread as a Microcosm of the Global Food Crisis
      The Science of Farm to Table: Sourdough Bread as a Microcosm of...
      Rob Dunn has recently published Never Out of Season, the story of the homogenization of our global food supply and the risks that homogenization poses. He will build on the stories from this...
      Speaker: Rob Dunn, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      2
      SEP 13, 2017 | 9:00 AM
      Insights into virus replication: the role of co-opted host proteins and lipids
      Insights into virus replication: the role of co-opted host proteins...
      Virus – host interactions are currently among the most intensively studied research areas due to the promising new antiviral approaches emerging from these studies. Indeed, RNA viruses,...
      Speaker: Peter L. Nagy, MD., PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      3
      SEP 13, 2017 | 9:00 AM
      How Biomarker Testing Shapes Immunotherapy
      How Biomarker Testing Shapes Immunotherapy
      The immune system is complex and dynamic, focused on defending the body from a host of pathogens ranging from viruses to cancer. A number of different mechanisms have evolved that help the bo...
      Speaker: Condie Carmack, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2017
      Sponsored By: Vela Diagnostics
      1
    JAN 30, 2018 | 9:00 AM
    WEBINAR: Metagenomics and base modifications from long, short, and linked-reads
    WEBINAR: Metagenomics and base modifications from long, short,...
    DATE: January 30, 2018TIME: 9:00AM PST, 12:00PM ESTInfectious disease surveillance and monitoring is critical in settings where disease outbreaks and antibiotic resistance can dramatica...
    Speaker: Christopher Mason, PhD , Shuiquan Tang, PhD
    Sponsored By: Zymo Research
    6 1
    NOV 08, 2017 | 1:30 PM
    Rapid Variant Interpretation and Reporting Using the QIAGEN Knowledgebase and QIAGEN Clinical Insight - Interpret (QCI-I)
    Rapid Variant Interpretation and Reporting Using the QIAGEN Knowledgebase...
    The advent of next generation sequencing has transformed the way we identify mutations with clinical implications. As the compendium of variants expands, gathering the most current and accura...
    Speaker: Jennifer Poitras, PhD
    Presented at: Clinical Diagnostics & Research Virtual Event Series 2017
    1
    NOV 06, 2017 | 8:00 AM
    WEBINAR:  Rapid PGS workflow using next-generation sequencing
    WEBINAR: Rapid PGS workflow using next-generation sequencing
    DATE: November 6, 2017TIME: 08:00am PST, 11:00pm EST, 5:00pm CET Set-up of a PGS platform: the Swiss experienceDr. Murisier’s lab investigated the different technical...
    Speaker: Fabien Murisier, PhD, ESHRE Senior Clinical Embryologist , Luis Alcaraz, PhD, CAP, Certificacion Sanitaria, CEQAS
    Sponsored By: Thermo Fisher Scientific - Ion Torrent
    8
    OCT 26, 2017 | 10:00 AM
    WEBINAR: Where to go from here: next generation clinical mass spectrometry
    WEBINAR: Where to go from here: next generation clinical mass...
    DATE: October 26, 2017TIME: 10:00am PT, 1:00pm ETMass spectrometry has gained tremendous interests in clinical applications in the past decade to serve patients needs.  W...
    Speaker: Victoria Zhang
    10
    OCT 25, 2017 | 6:00 AM
    WEBINAR #3:  Enabling neurological disease research via DNA fragment analysis on the new SeqStudio genetic analyzer
    WEBINAR #3: Enabling neurological disease research via DNA fragment...
    DATE: October 25, 2017TIME: 06:00am PDT, 09:00am EDTThis is the third topic in the webinar series on ‘Sanger Sequencing & Fragment Analysis made easy’.Repetitive DNA...
    Speaker: Gary Latham, PhD
    Sponsored By: Thermo Fisher Scientific
    3
     
     
  • OCT 12, 2017 | 12:00 PM
    Detection of circulating tumour biomarkers using the FirePlex® Technology Platform
    Detection of circulating tumour biomarkers using the FirePlex®...
    The detection of circulating molecular biomarkers is useful for monitoring pathogenic processes and response to therapeutic intervention1,2. In cancer, genomic and proteomic biomarkers are us...
    Speaker: Daniel Pregibon, PhD
    Presented at: Abcam virtual exhibition: support and products to advance your research
    2
    OCT 12, 2017 | 12:00 PM
    Comprehensive genomic and transcriptomic analysis of acral melanoma: A path towards therapeutic development
    Comprehensive genomic and transcriptomic analysis of acral melanoma:...
    Acral lentiginous melanoma (ALM) is a rare sun-shielded melanoma subtype associated with worse survival than cutaneous melanoma (CM), a more common form of skin cancer linked to exposure to u...
    Speaker: Winnie Liang, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
    1
    OCT 12, 2017 | 12:00 PM
    Detection of circulating tumour biomarkers using the FirePlex® Technology Platform
    Detection of circulating tumour biomarkers using the FirePlex®...
    The detection of circulating molecular biomarkers is useful for monitoring pathogenic processes and response to therapeutic intervention1,2. In cancer, genomic and proteomic biomarkers are us...
    Speaker: Daniel Pregibon, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
    Sponsored By: Abcam
    1
    OCT 12, 2017 | 9:00 AM
    Circulating biomarkers - what matters for the isolation of biomarkers from Liquid Biopsy samples
    Circulating biomarkers - what matters for the isolation of biomarkers...
    The analysis of circulating biomarkers in a patient’s blood holds significant potential for early disease detection and disease monitoring. Circulating DNA is the most commonly studied...
    Speaker: Verena Schramm, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
    Sponsored By: QIAGEN Molecular Diagnostics
    1
    OCT 11, 2017 | 6:00 AM
    A Pan-Cancer view of gene expression in Immuno-Oncology with particular applications in ovarian cancer
    A Pan-Cancer view of gene expression in Immuno-Oncology with particular...
    There has been a great deal of renewed attention in immuno-oncology over the last decade.   Therapies for cancer are being developed, approved, and administered that can either initiate,...
    Speaker: Wendell Jones, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2017
    2
     
     
  • SEP 28, 2017 | 7:30 AM
    Keynote Presentation: RNA-targeting CRISPR and application to diseases
    Keynote Presentation: RNA-targeting CRISPR and application to...
    I will present my lab’s effort on studying and manipulating RNA processing, with particular emphasis on using CRISPR/Cas systems for targeting RNA in living cells in diseases such as my...
    Speaker: Gene Yeo, PhD
    Presented at: Cell Biology Virtual Event Series 2017
    1
    SEP 14, 2017 | 1:30 PM
    Dissecting the ecological and molecular mechanisms underlying the interaction between plant viruses and their insect vectors
    Dissecting the ecological and molecular mechanisms underlying...
    Plant viruses cause significant damage in terms of reduction in quality and quantity of yield in a wide range of crop plants worldwide. The majority of plant viruses are transmitted from one...
    Speaker: Punya Nachappa, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 12:00 PM
    How to deploy a portable lab for the surveillance of emerging infectious diseases
    How to deploy a portable lab for the surveillance of emerging...
    Genome sequencing can be used to discover new pathogens but it can also be used to monitor known ones. This is known as genomic surveillance and it becoming an increasingly important tool in...
    Speaker: Josh Quick
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Oxford Nanopore Technologies
    1
    SEP 14, 2017 | 10:30 AM
    Clinical and Laboratory Studies of Zika Virus Infection
    Clinical and Laboratory Studies of Zika Virus Infection
    An unbiased metagenomic next-generation approach (mNGS) been shown to be useful in the broad identification of pathogens in clinical samples for infectious disease diagnosis, including viruse...
    Speaker: Charles Chiu, MD, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 10:30 AM
    Sex as a Biological Variable in Microbial Pathogenesis
    Sex as a Biological Variable in Microbial Pathogenesis
    Males and females differ in their immunological responses to viral and vaccine antigens, with females typically mounting higher immune responses than males. These sex-based immunological diff...
    Speaker: Sabra L. Klein, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    4
     
     
  • SEP 14, 2017 | 9:00 AM
    Development of tools enabling tunable, in situ delivery of therapeutics using probiotics
    Development of tools enabling tunable, in situ delivery of therapeutics...
    The human large intestine houses trillions of microorganisms which collectively form the highly diverse microbial community known as the gut microbiota. The gut microbiota performs many funct...
    Speaker: Nathan Crook, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 14, 2017 | 7:30 AM
    Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial Drug Resistance
    Keynote Presentation: A Mechanistic Approach to Overcoming Antibacterial...
    Quinolones are one the most commonly prescribed classes of antibacterials in the world and are used to treat a broad variety of Gram-negative and Gram-positive bacterial infections in humans....
    Speaker: Neil Osheroff, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
    SEP 14, 2017 | 6:00 AM
    A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in an unrelated dsRNA virus: taxonomic and evolutionary considerations
    A neo-virus lifestyle exhibited by a (+)ssRNA virus hosted in...
    A rapidly growing number of viruses of lower eukaryotes have been reported in the past few decades. These have enhanced our understanding of virus evolution and diversity. Simultaneously, som...
    Speaker: Nobuhiro Suzuki, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3
    SEP 13, 2017 | 1:30 PM
    Integration of the Simplexa C. difficile Direct assay in a two-step algorithm for the laboratory diagnosis of C. difficile
    Integration of the Simplexa C. difficile Direct assay in a two-step...
    Clostridium difficile is a major pathogen responsible for infectious diarrhea in healthcare settings. This presentation will review the data from a study comparing the new Simplexa® C. di...
    Speaker: Dr. James Snyder
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Diasorin
    2
    SEP 13, 2017 | 1:30 PM
    The escalating challenges of antimicrobial resistance and the efforts to conquer these threats
    The escalating challenges of antimicrobial resistance and the...
    The global threat of antimicrobial resistance has been recognized by the World Health Organization, the United Nations and many other expert bodies. The burden of resistant pathogens is immen...
    Speaker: Glenn Tillotson, PhD, FIDSA, FCCP
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3 1
     
     
  • SEP 13, 2017 | 12:00 PM
    High Resolution Outbreak Tracing and Resistance Detection using Whole Genome Sequencing in the case of a Mycobacterium tuberculosis Outbreak
    High Resolution Outbreak Tracing and Resistance Detection using...
    Background: In March 2014, a molecular cluster of five multidrug resistant Mycobacterium tuberculosis was detected by the Austrian National Reference Laboratory. An investigation was initiate...
    Speaker: Winnie Ridderberg, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    1
    SEP 13, 2017 | 10:30 AM
    The Science of Farm to Table: Sourdough Bread as a Microcosm of the Global Food Crisis
    The Science of Farm to Table: Sourdough Bread as a Microcosm of...
    Rob Dunn has recently published Never Out of Season, the story of the homogenization of our global food supply and the risks that homogenization poses. He will build on the stories from this...
    Speaker: Rob Dunn, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    2
    SEP 13, 2017 | 9:00 AM
    Insights into virus replication: the role of co-opted host proteins and lipids
    Insights into virus replication: the role of co-opted host proteins...
    Virus – host interactions are currently among the most intensively studied research areas due to the promising new antiviral approaches emerging from these studies. Indeed, RNA viruses,...
    Speaker: Peter L. Nagy, MD., PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    3
    SEP 13, 2017 | 9:00 AM
    How Biomarker Testing Shapes Immunotherapy
    How Biomarker Testing Shapes Immunotherapy
    The immune system is complex and dynamic, focused on defending the body from a host of pathogens ranging from viruses to cancer. A number of different mechanisms have evolved that help the bo...
    Speaker: Condie Carmack, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2017
    Sponsored By: Vela Diagnostics
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