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    Comparative Genomics

    Comparative Genomics: is a field of biological research in which the genomic features of different organisms are compared. The genomic features may include the DNA sequence, genes, gene order, regulatory sequences, and other genomic structural landmarks.

    Webinars

    • OCT 13, 2021 | 12:00 AM
      Rapid and Inexpensive Whole-Genome Sequencing of SARS-CoV-2 Using the "Midnight" Panel
      Rapid and Inexpensive Whole-Genome Sequencing of SARS-CoV-2 Using...
      I will discuss the development of the “Midnight” panel for faster, simpler, and less expensive SARS-CoV-2 genome sequencing. We show that using a multiplexed set of primers in co...
      Speaker: Nikki Freed, PhD
      Presented at: Coronavirus Series
      2
      SEP 08, 2021 | 12:00 AM
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
      Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
      The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
      Speaker: Ramy K. Aziz, PhD
      Presented at: Microbiology Week Virtual Event Series 2021
      1
      AUG 25, 2021 | 12:00 AM
      Mechanistic Insight into Tandem Repeat Expansions in Amyotrophic Lateral Sclerosis
      Mechanistic Insight into Tandem Repeat Expansions in Amyotrophic...
      Over 40 tandem repeats undergo expansion events that lead to neurological disease. This number is likely an underestimate as many repeats are difficult to amplify using existing short read s...
      Speaker: Paul Valdmanis, PhD
      Presented at: Neuroscience Virtual Event Series 2021
      Sponsored By: PacBio
      1
      JUN 29, 2021 | 10:00 AM
      Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2 Variants
      Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2...
      Date: June 29, 2021 Time: 10:00am (PDT), 1:00pm (EDT) SARS-CoV-2 continues to evolve and surveillance of variants is a necessity. Routine analysis of genetic sequence data allows the identif...
      Speaker: Donna Wolk, MHA, PhD, D(ABMM)
      Sponsored By: Diasorin
      16
      APR 20, 2021 | 4:30 PM
      C.E. CREDITS
      High-throughput clinical and environmental viral extraction and sequencing
      High-throughput clinical and environmental viral extraction and...
      COVID-19 is a severe disease that has caused >1 million deaths in under one year. As this disease is novel, the molecular and cellular underpinnings of the progressive tissue injury are p...
      Speaker: Christopher Mason, Ph.D
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: Tecan
      2
      APR 20, 2021 | 9:00 AM
      Enhancer-Promoter Interactome Drives Neuronal Cell Differentiation and Contextualizes Alzheimer's Associated Polymorphisms
      Enhancer-Promoter Interactome Drives Neuronal Cell Differentiation...
      Chromatin Immunoprecipitation, coupled with sequencing, has shaped our understanding of how transcriptional machinery interacts with genomes to facilitate gene regulation. These protein-DNA...
      Speaker: Cory Padilla, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: Dovetail Genomics
      1
      APR 20, 2021 | 7:30 AM
      C.E. CREDITS
      Keynote Presentation: A structural variation map of 499 Han Chinese individuals using long-read sequencing data
      Keynote Presentation: A structural variation map of 499 Han Chinese...
      Structural variants (SVs) are essential in human evolution and genetic disease but remain understudied. This is especially the case for non-Caucasian ethnicities. We report, for the first ti...
      Speaker: Fritz Sedlazeck, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      1
      APR 20, 2021 | 6:00 AM
      Panel Presentation: Accelerating SARS-CoV-2 genomic surveillance with a new high-throughput NGS solution
      Panel Presentation: Accelerating SARS-CoV-2 genomic surveillance...
      Since late 2020, several prominent SARS-CoV-2 variants of concern have emerged harboring specific mutations which increase viral transmissibility (e.g., lineage B.1.1.7), and which appear to...
      Speaker: Brian Dugan, M.S. , Fernando Spikli, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      Sponsored By: QIAGEN
      1
      APR 20, 2021 | 12:00 AM
      The Structure, Function, and Evolution of Human Chromosome 8
      The Structure, Function, and Evolution of Human Chromosome 8
      The complete assembly of each human chromosome is essential for understanding human biology and evolution. Using complementary long-read sequencing technologies, we complete the first linear...
      Speaker: Glennis Logsdon, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      APR 20, 2021 | 12:00 AM
      C.E. CREDITS
      Telomere-to-Telomere Chromosome Assemblies: New Insights Into Genome Biology and Structure
      Telomere-to-Telomere Chromosome Assemblies: New Insights Into...
      We are entering into an exciting era of genomics where truly complete, high-quality assemblies of human chromosomes are available end-to-end, or from ‘telomere-to-telomere’ (T2T)...
      Speaker: Karen Miga, PhD
      Presented at: Genetics Week Virtual Event Series 2021
      2
      JAN 28, 2021 | 7:00 AM
      Utilization of Optical Genome Mapping in Detection and Characterization of Rare Genetic Markers in Pediatric Leukemias
      Utilization of Optical Genome Mapping in Detection and Characterization...
      Date: January 28, 2021 Time: 7:00am (PST), 10:00am (EST) Many of the newly recognized clinically significant genetic markers in pediatric leukemias cannot be reliably detected by routine dia...
      Speaker: Gordana Raca, MD, PhD, FACMG
      Sponsored By: Bionano
      10
      DEC 03, 2020 | 4:30 PM
      An Iterative Approach to Structure-based in silico to in vivo Development of Combinatorial Anti-SARS-CoV-2 Therapy
      An Iterative Approach to Structure-based in silico to in vivo...
      This drug development program is designed to create a family of broad-spectrum, pan-coronaviral drugs that respectively inhibit multiple key enzymes required for viral replication. By target...
      Speaker: Garth Ehrlich, PhD, FAAAS
      Presented at: Coronavirus Series
      5
      DEC 03, 2020 | 3:00 PM
      Novel SARS-Cov-2 Neutralization Antibody test, performance and applications
      Novel SARS-Cov-2 Neutralization Antibody test, performance and...
      The presentation will provide a review of major emerging zoonotic virus outbreaks from Hendra virus in 1994 in Australia to SARS-CoV-2 in China 2019 and our latest findings on bat biology an...
      Speaker: Roumen Bogoev, MSc
      Presented at: Coronavirus Series
      Sponsored By: GenScript
      3
      November 13, 2020 5:00 PM PST | November 14, 2020 9:00 AM SGT
      Representative sampling to address tumor heterogeneity
      Representative sampling to address tumor heterogeneity
      Ensuring that clinical tests are not affected by tumor heterogeneity requires a sampling methodology that captures the genomic, proteomic, and cellular diversity of entire solid tumors. Howe...
      Speaker: Nelson Alexander, PhD
      Presented at: DISCOVERY Global User Symposium
      2
      November 12, 2020 10:00 AM PST | 5:00 PM GMT
      Representative sampling to address tumor heterogeneity
      Representative sampling to address tumor heterogeneity
      Ensuring that clinical tests are not affected by tumor heterogeneity requires a sampling methodology that captures the genomic, proteomic, and cellular diversity of entire solid tumors. Howe...
      Speaker: Nelson Alexander, PhD
      Presented at: DISCOVERY Global User Symposium
      2
      OCT 22, 2020 | 1:15 PM
      Utilizing the Genexus System to Detect Complex Genetic Variants in Human Tissue Specimens
      Utilizing the Genexus System to Detect Complex Genetic Variants...
      To identify genetic variants in archival human samples, researchers need a powerful NGS platform that can accommodate input DNA and RNA that is often low quality and/or low quantity. This ch...
      Speaker: Craig Mackinnon, MD, PhD
      Presented at: OncomineWorld 2022: A Virtual NGS Education Meeting
      0
      OCT 22, 2020 | 7:40 AM
      First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for comprehensive genomic profiling
      First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for...
      IIdentification of relevant mutations, determination of tumor mutational burden (TMB) and microsatellite (MS) status are paramount to precision oncology research and the Oncomine Comprehensi...
      Speaker: Ines Raineri, MD
      Presented at: OncomineWorld 2022: A Virtual NGS Education Meeting
      0
      OCT 22, 2020 | 7:40 AM
      First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for comprehensive genomic profiling
      First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for...
      Identification of actionable mutations, determination of tumor mutational burden (TMB) and microsatellite (MS) status are paramount to precision oncology and the Oncomine Comprehensive Assay...
      Speaker: Ines Raineri, MD
      Presented at: OncomineWorld Autumn: A virtual NGS education meeting
      1
      OCT 08, 2020 | 12:00 AM
      Getting Under the Hood of Racial Disparities in Prostate Cancer
      Getting Under the Hood of Racial Disparities in Prostate Cancer
      Learning Objectives: 1. Understand the evolving epidemiology of prostate cancer in the the US and globally, and the excess burden of disease borne by men of African ancestry 2. Describe the...
      Speaker: Matthew R. Cooperberg, MD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
      1
      OCT 08, 2020 | 12:00 AM
      Transcriptome analysis of breast cancer clinical specimens with long-read sequencer
      Transcriptome analysis of breast cancer clinical specimens with...
      Changes in transcriptional regulation are thought to be one of the key drivers of carcinogenesis. Although next-generation sequencer revolutionized transcriptome analysis, there are limitati...
      Speaker: Masahito Kawazu, MD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
      1
      OCT 07, 2020 | 12:00 AM
      Oncogene additivity in the PI3K pathway in cancer
      Oncogene additivity in the PI3K pathway in cancer
      Activating mutations in PIK3CA are frequent in human breast cancer, and phosphoinositide 3-kinase alpha (PI3Kα) inhibitors have been approved for therapy. To characterize determinants...
      Speaker: Neil Vasan, MD, PhD
      Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
      2
      SEP 17, 2020 | 12:00 PM
      Advanced NGS solutions for SARS-CoV-2 monitoring and insights
      Advanced NGS solutions for SARS-CoV-2 monitoring and insights
      Next-generation sequencing (NGS) is the primary technology used to identify genomic targets for vaccine development, detect emerging viral strains and monitor transmission patterns. Enhanced...
      Speaker: Cris Kinross
      Presented at: Coronavirus Series
      Sponsored By: Thermo Fisher Scientific
      1
      SEP 10, 2020 | 11:00 AM
      Optimizing the extraction of human microbiome samples
      Optimizing the extraction of human microbiome samples
      Learning Objectives: 1. Understand the challenges of extracting DNA from human samples for microbiome analysis, and learn about the best technologies for accomplishing this 2. Learn about pr...
      Speaker: Dominic O'Neil, MS, MBA
      Presented at: Microbiology Week Virtual Event Series 2020
      Sponsored By: QIAGEN
      2
      SEP 10, 2020 | 12:00 AM
      A novel strategy to investigate longitudinal changes within the gut microbiome: Insights from mouse models of sepsis and Alzheimer's disease
      A novel strategy to investigate longitudinal changes within the...
      Sepsis is a life-threatening condition that is caused by the immune system’s inability to respond appropriately to an infection. How sepsis can change the gut microbiome in ways that a...
      Speaker: Candice M. Brown, PhD
      Presented at: Microbiology Week Virtual Event Series 2020
      1
    OCT 13, 2021 | 12:00 AM
    Rapid and Inexpensive Whole-Genome Sequencing of SARS-CoV-2 Using the "Midnight" Panel
    Rapid and Inexpensive Whole-Genome Sequencing of SARS-CoV-2 Using...
    I will discuss the development of the “Midnight” panel for faster, simpler, and less expensive SARS-CoV-2 genome sequencing. We show that using a multiplexed set of primers in co...
    Speaker: Nikki Freed, PhD
    Presented at: Coronavirus Series
    2
    SEP 08, 2021 | 12:00 AM
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty to Pharmaceutical and Clinical Application(s)
    Translating Pharmacomicrobiomics: From Microbiome Cloud Uncertainty...
    The Human Microbiome Project was conceived almost 15 years ago, as an extension of the Human Genome Project, to explore the diversity of human-associated microorganisms at multiple body site...
    Speaker: Ramy K. Aziz, PhD
    Presented at: Microbiology Week Virtual Event Series 2021
    1
    AUG 25, 2021 | 12:00 AM
    Mechanistic Insight into Tandem Repeat Expansions in Amyotrophic Lateral Sclerosis
    Mechanistic Insight into Tandem Repeat Expansions in Amyotrophic...
    Over 40 tandem repeats undergo expansion events that lead to neurological disease. This number is likely an underestimate as many repeats are difficult to amplify using existing short read s...
    Speaker: Paul Valdmanis, PhD
    Presented at: Neuroscience Virtual Event Series 2021
    Sponsored By: PacBio
    1
    JUN 29, 2021 | 10:00 AM
    Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2 Variants
    Approaches for Rapid Genomic Surveillance to Identify SARS-CoV-2...
    Date: June 29, 2021 Time: 10:00am (PDT), 1:00pm (EDT) SARS-CoV-2 continues to evolve and surveillance of variants is a necessity. Routine analysis of genetic sequence data allows the identif...
    Speaker: Donna Wolk, MHA, PhD, D(ABMM)
    Sponsored By: Diasorin
    16
    APR 20, 2021 | 4:30 PM
    C.E. CREDITS
    High-throughput clinical and environmental viral extraction and sequencing
    High-throughput clinical and environmental viral extraction and...
    COVID-19 is a severe disease that has caused >1 million deaths in under one year. As this disease is novel, the molecular and cellular underpinnings of the progressive tissue injury are p...
    Speaker: Christopher Mason, Ph.D
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: Tecan
    2
     
     
  • APR 20, 2021 | 9:00 AM
    Enhancer-Promoter Interactome Drives Neuronal Cell Differentiation and Contextualizes Alzheimer's Associated Polymorphisms
    Enhancer-Promoter Interactome Drives Neuronal Cell Differentiation...
    Chromatin Immunoprecipitation, coupled with sequencing, has shaped our understanding of how transcriptional machinery interacts with genomes to facilitate gene regulation. These protein-DNA...
    Speaker: Cory Padilla, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: Dovetail Genomics
    1
    APR 20, 2021 | 7:30 AM
    C.E. CREDITS
    Keynote Presentation: A structural variation map of 499 Han Chinese individuals using long-read sequencing data
    Keynote Presentation: A structural variation map of 499 Han Chinese...
    Structural variants (SVs) are essential in human evolution and genetic disease but remain understudied. This is especially the case for non-Caucasian ethnicities. We report, for the first ti...
    Speaker: Fritz Sedlazeck, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    1
    APR 20, 2021 | 6:00 AM
    Panel Presentation: Accelerating SARS-CoV-2 genomic surveillance with a new high-throughput NGS solution
    Panel Presentation: Accelerating SARS-CoV-2 genomic surveillance...
    Since late 2020, several prominent SARS-CoV-2 variants of concern have emerged harboring specific mutations which increase viral transmissibility (e.g., lineage B.1.1.7), and which appear to...
    Speaker: Brian Dugan, M.S. , Fernando Spikli, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    Sponsored By: QIAGEN
    1
    APR 20, 2021 | 12:00 AM
    The Structure, Function, and Evolution of Human Chromosome 8
    The Structure, Function, and Evolution of Human Chromosome 8
    The complete assembly of each human chromosome is essential for understanding human biology and evolution. Using complementary long-read sequencing technologies, we complete the first linear...
    Speaker: Glennis Logsdon, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
    APR 20, 2021 | 12:00 AM
    C.E. CREDITS
    Telomere-to-Telomere Chromosome Assemblies: New Insights Into Genome Biology and Structure
    Telomere-to-Telomere Chromosome Assemblies: New Insights Into...
    We are entering into an exciting era of genomics where truly complete, high-quality assemblies of human chromosomes are available end-to-end, or from ‘telomere-to-telomere’ (T2T)...
    Speaker: Karen Miga, PhD
    Presented at: Genetics Week Virtual Event Series 2021
    2
     
     
  • JAN 28, 2021 | 7:00 AM
    Utilization of Optical Genome Mapping in Detection and Characterization of Rare Genetic Markers in Pediatric Leukemias
    Utilization of Optical Genome Mapping in Detection and Characterization...
    Date: January 28, 2021 Time: 7:00am (PST), 10:00am (EST) Many of the newly recognized clinically significant genetic markers in pediatric leukemias cannot be reliably detected by routine dia...
    Speaker: Gordana Raca, MD, PhD, FACMG
    Sponsored By: Bionano
    10
    DEC 03, 2020 | 4:30 PM
    An Iterative Approach to Structure-based in silico to in vivo Development of Combinatorial Anti-SARS-CoV-2 Therapy
    An Iterative Approach to Structure-based in silico to in vivo...
    This drug development program is designed to create a family of broad-spectrum, pan-coronaviral drugs that respectively inhibit multiple key enzymes required for viral replication. By target...
    Speaker: Garth Ehrlich, PhD, FAAAS
    Presented at: Coronavirus Series
    5
    DEC 03, 2020 | 3:00 PM
    Novel SARS-Cov-2 Neutralization Antibody test, performance and applications
    Novel SARS-Cov-2 Neutralization Antibody test, performance and...
    The presentation will provide a review of major emerging zoonotic virus outbreaks from Hendra virus in 1994 in Australia to SARS-CoV-2 in China 2019 and our latest findings on bat biology an...
    Speaker: Roumen Bogoev, MSc
    Presented at: Coronavirus Series
    Sponsored By: GenScript
    3
    November 13, 2020 5:00 PM PST | November 14, 2020 9:00 AM SGT
    Representative sampling to address tumor heterogeneity
    Representative sampling to address tumor heterogeneity
    Ensuring that clinical tests are not affected by tumor heterogeneity requires a sampling methodology that captures the genomic, proteomic, and cellular diversity of entire solid tumors. Howe...
    Speaker: Nelson Alexander, PhD
    Presented at: DISCOVERY Global User Symposium
    2
    November 12, 2020 10:00 AM PST | 5:00 PM GMT
    Representative sampling to address tumor heterogeneity
    Representative sampling to address tumor heterogeneity
    Ensuring that clinical tests are not affected by tumor heterogeneity requires a sampling methodology that captures the genomic, proteomic, and cellular diversity of entire solid tumors. Howe...
    Speaker: Nelson Alexander, PhD
    Presented at: DISCOVERY Global User Symposium
    2
     
     
  • OCT 22, 2020 | 1:15 PM
    Utilizing the Genexus System to Detect Complex Genetic Variants in Human Tissue Specimens
    Utilizing the Genexus System to Detect Complex Genetic Variants...
    To identify genetic variants in archival human samples, researchers need a powerful NGS platform that can accommodate input DNA and RNA that is often low quality and/or low quantity. This ch...
    Speaker: Craig Mackinnon, MD, PhD
    Presented at: OncomineWorld 2022: A Virtual NGS Education Meeting
    0
    OCT 22, 2020 | 7:40 AM
    First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for comprehensive genomic profiling
    First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for...
    IIdentification of relevant mutations, determination of tumor mutational burden (TMB) and microsatellite (MS) status are paramount to precision oncology research and the Oncomine Comprehensi...
    Speaker: Ines Raineri, MD
    Presented at: OncomineWorld 2022: A Virtual NGS Education Meeting
    0
    OCT 22, 2020 | 7:40 AM
    First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for comprehensive genomic profiling
    First Experiences with Oncomineâ„¢ Comprehensive Assay Plus for...
    Identification of actionable mutations, determination of tumor mutational burden (TMB) and microsatellite (MS) status are paramount to precision oncology and the Oncomine Comprehensive Assay...
    Speaker: Ines Raineri, MD
    Presented at: OncomineWorld Autumn: A virtual NGS education meeting
    1
    OCT 08, 2020 | 12:00 AM
    Getting Under the Hood of Racial Disparities in Prostate Cancer
    Getting Under the Hood of Racial Disparities in Prostate Cancer
    Learning Objectives: 1. Understand the evolving epidemiology of prostate cancer in the the US and globally, and the excess burden of disease borne by men of African ancestry 2. Describe the...
    Speaker: Matthew R. Cooperberg, MD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
    1
    OCT 08, 2020 | 12:00 AM
    Transcriptome analysis of breast cancer clinical specimens with long-read sequencer
    Transcriptome analysis of breast cancer clinical specimens with...
    Changes in transcriptional regulation are thought to be one of the key drivers of carcinogenesis. Although next-generation sequencer revolutionized transcriptome analysis, there are limitati...
    Speaker: Masahito Kawazu, MD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
    1
     
     
  • OCT 07, 2020 | 12:00 AM
    Oncogene additivity in the PI3K pathway in cancer
    Oncogene additivity in the PI3K pathway in cancer
    Activating mutations in PIK3CA are frequent in human breast cancer, and phosphoinositide 3-kinase alpha (PI3Kα) inhibitors have been approved for therapy. To characterize determinants...
    Speaker: Neil Vasan, MD, PhD
    Presented at: Cancer Research & Oncology Week Virtual Event Series 2020
    2
    SEP 17, 2020 | 12:00 PM
    Advanced NGS solutions for SARS-CoV-2 monitoring and insights
    Advanced NGS solutions for SARS-CoV-2 monitoring and insights
    Next-generation sequencing (NGS) is the primary technology used to identify genomic targets for vaccine development, detect emerging viral strains and monitor transmission patterns. Enhanced...
    Speaker: Cris Kinross
    Presented at: Coronavirus Series
    Sponsored By: Thermo Fisher Scientific
    1
    SEP 10, 2020 | 11:00 AM
    Optimizing the extraction of human microbiome samples
    Optimizing the extraction of human microbiome samples
    Learning Objectives: 1. Understand the challenges of extracting DNA from human samples for microbiome analysis, and learn about the best technologies for accomplishing this 2. Learn about pr...
    Speaker: Dominic O'Neil, MS, MBA
    Presented at: Microbiology Week Virtual Event Series 2020
    Sponsored By: QIAGEN
    2
    SEP 10, 2020 | 12:00 AM
    A novel strategy to investigate longitudinal changes within the gut microbiome: Insights from mouse models of sepsis and Alzheimer's disease
    A novel strategy to investigate longitudinal changes within the...
    Sepsis is a life-threatening condition that is caused by the immune system’s inability to respond appropriately to an infection. How sepsis can change the gut microbiome in ways that a...
    Speaker: Candice M. Brown, PhD
    Presented at: Microbiology Week Virtual Event Series 2020
    1
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