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    Microbials

    Microbials (Bacteria) are unique living organisms that live their life as a single cell for its entirety. Bacillus is a specific type of (genus) of bacteria which grow aerobically (with oxygen) and to some extent anaerobically (without oxygen and forms spores. Microbial pre-treatment, also known as pre-acidification or multi-stage fermentation, is a simple kind of pre-treatment technology in which the first steps of anaerobic digestion (hydrolysis and acidogenesis) are separated from acetogenesis and methanogenesis.

    Webinars

    • MAY 16, 2019 | 4:00 PM
      Towards Standardized Workflows - A focus on microbiome insights
      Towards Standardized Workflows - A focus on microbiome insights
      DATE: May 16, 2019TIME: 7:00am PDT, 10:00am EDT, 4:00pm CEST The emergence of NGS is revolutionizing the microbiological sciences and transforming medicine. Deep sequencing has...
      Speaker: Rita Colwell, PhD , Christiane Honisch, PhD
      Sponsored By: Eppendorf
      10 2
      MAY 09, 2019 | 12:00 PM
      A Metagenomic Assay to Interrogate the Role of Virome and Microbiome in Cancer
      A Metagenomic Assay to Interrogate the Role of Virome and Microbiome...
      Screening to identify all known viruses and other pathogenic microorganisms including bacteria, fungus and parasites in human tumor tissues will provide a more comprehensive understanding of...
      Speaker: Erle Robertson, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2019
      Sponsored By: Agilent
      3
      APR 25, 2019 | 9:00 AM
      Keynote Presentation: The Next Pandemic
      Keynote Presentation: The Next Pandemic
      “Emerging infections” are those that appear suddenly or are rapidly increasing in incidence or geographic range (e.g., HIV/AIDS, Ebola, SARS, Middle East Respiratory Syndrome [MER...
      Speaker: Stephen S. Morse, PhD, FAAM, F.A.C.E.
      Presented at: Infectious Disease Virtual Event Series 2019
      6
      APR 25, 2019 | 6:00 AM
      Long-Read Sequencing and Infectious Disease: New Insights Into Longstanding Challenges
      Long-Read Sequencing and Infectious Disease: New Insights Into...
      To reduce the global burden diseases causes by infectious disease, including parasites and bacteria, scientists need better information about mechanisms of virulence, immune evasion, and drug...
      Speaker: Meredith Ashby, PhD
      Presented at: Infectious Disease Virtual Event Series 2019
      Sponsored By: PacBio
      2
      APR 10, 2019 | 1:30 PM
      Laboratory Medicine Beyond The Box: Value Based Health Care & Diagnostic Evidence
      Laboratory Medicine Beyond The Box: Value Based Health Care &...
      Integration of technology is influencing practice in the clinical laboratory and treatment of patients in the clinical practice arena. As laboratories begin to move from a volume to value mod...
      Speaker: Elizabeth Marlowe, PhD, D(ABMM) , Joanna Sickler, MPH, MBA
      Presented at: Molecular Diagnostics Virtual Event Series 2019
      4
      MAR 28, 2019 | 1:30 PM
      How Multiplexed Microarray Technology is Revolutionizing Microbial Testing in Cannabis
      How Multiplexed Microarray Technology is Revolutionizing Microbial...
      The world is filled with harmful pathogens that increasingly threaten the safety of our cannabis, food and beverages. And yet, testing labs still rely on the Petri dishes scientists invented...
      Speaker: Milan Patel
      Presented at: Cannabis Sciences Virtual Event Series 2019
      3
      MAR 05, 2019 | 9:00 AM
      Strategies to normalize miRNA expression in serum and plasma.
      Strategies to normalize miRNA expression in serum and plasma.
      DATE:  March 5, 2019TIME:  09:00am PST, 12:00pm EST MicroRNA(miRNA) are short non-coding single stranded RNA molecules that regulate gene expression at the post tran...
      Speaker: Emily Zeringer , Harita Veereshlingam, PhD
      Sponsored By: Thermo Fisher Scientific - Applied Biosystems
      7
      OCT 09, 2018 | 6:30 AM
      Good culture for your cells - Best practices for preventing contamination
      Good culture for your cells - Best practices for preventing contamination
      DATE:  October 9, 2018TIME:   06:30am PDT, 3:30pm CEST Are ethanol and antibiotics the best measures to prevent microbial contamination? Contamination is an ev...
      Speaker: Jessica Wagener, PhD
      Sponsored By: Eppendorf
      21 4
      SEP 18, 2018 | 7:00 AM
      Scaling end-to-end NGS solutions for clinical diagnostics in the cloud
      Scaling end-to-end NGS solutions for clinical diagnostics in the...
      DATE: September 18, 2018TIME:  07:00am PDT, 2:00pm GMT Next Generation Sequencing has become an essential tool in clinical diagnostic laboratories, however this technolo...
      Speaker: Joo Wook Ahn , Andrew Bond , Mattias Jansson , Alessandro Riccombeni, PhD
      Sponsored By: DNAnexus, QIAGEN
      6
      SEP 13, 2018 | 1:30 PM
      New PacBio Solutions for High-Resolution Microbiology & Immunology Analysis
      New PacBio Solutions for High-Resolution Microbiology & Immunology...
      PacBio Sequencing has been recognized as the gold standard in microbial sequencing due to simultaneously providing long sequence reads (genome contiguity), high consensus accuracy (genome acc...
      Speaker: Jonas Korlach, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: PacBio
      1
      SEP 13, 2018 | 9:00 AM
      Viruses in Soils - What Do We Know, and Where Do We Go From Here?
      Viruses in Soils - What Do We Know, and Where Do We Go From Here?
      Viruses outnumber bacteria in soil by as much as 1000:1. However, there are few studies which examine the ways viral communities impact the soil microbiome, chemical cycles, and plants. Recen...
      Speaker: Laura Zinke, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      2
      SEP 13, 2018 | 9:00 AM
      Novel Solutions for Unbiased Results in Metagenomic Analysis of Human Microbiome Samples
      Novel Solutions for Unbiased Results in Metagenomic Analysis of...
      This two-part webinar will focus on novel techniques for obtaining unbiased results in 16S rRNA gene sequencing of challenging microbiome samples. Part 1 will feature QIAGEN’s solutions...
      Speaker: Matthew Fosbrink, PhD , Dominic O'Neil
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: QIAGEN
      1
      SEP 13, 2018 | 6:00 AM
      The Hurricane Microbiome Project: Environmental Exposures and Population Health
      The Hurricane Microbiome Project: Environmental Exposures and...
      The Alkek Center for Metagenomics and Microbiome Research (CMMR) at Baylor College of Medicine is pursuing numerous research and development efforts in the study of how the microbiome impacts...
      Speaker: Joseph Petrosino, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 12, 2018 | 1:30 PM
      The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic Bacteria
      The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic...
      Reducing the impact of infectious diseases is becoming increasingly vital as the prevalence of antimicrobial resistance (AMR) continues to rise, threatening the effective prevention and treat...
      Speaker: Julie Russell, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 12, 2018 | 12:00 PM
      Antimicrobial Resistance Identification, Strain Typing, and Assay Design with CLC Genomics Workbench
      Antimicrobial Resistance Identification, Strain Typing, and Assay...
      Whole genome sequencing of bacterial isolates via next-generation sequencing is becoming a standard approach for clinical microbiology and bio-surveillance labs seeking to conduct outbreak in...
      Speaker: Winnie Ridderberg, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      Sponsored By: QIAGEN
      3
      SEP 12, 2018 | 12:00 PM
      Tracking Antibiotic Resistance Across Space and Time
      Tracking Antibiotic Resistance Across Space and Time
      Horizontal gene transfer (HGT) has long been recognized as an important source of genetic diversity. In the clinical setting, HGT plays an important role in the spread of antibiotic resistanc...
      Speaker: Sean Conlan, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      1
      SEP 12, 2018 | 6:00 AM
      Advancing Metagenomic Tools for Monitoring Antibiotic Resistance and Pathogen Gene Markers in Water and the Environment
      Advancing Metagenomic Tools for Monitoring Antibiotic Resistance...
      Next-generation DNA sequencing has opened new possibilities for microbial water quality monitoring, particularly for addressing emerging concerns like antibiotic resistance and opportunistic...
      Speaker: Amy Pruden, PhD
      Presented at: Microbiology & Immunology Virtual Event Series 2018
      3
      JUN 21, 2018 | 7:30 AM
      Keynote Presentation: Paving the Path Towards Precision Medicine in Inflammatory Bowel Diseases
      Keynote Presentation: Paving the Path Towards Precision Medicine...
      Crohn’s disease and ulcerative colitis also known as inflammatory bowel diseases or IBD, are characterized by chronic, recurrent inflammation of the gastrointestinal tract, which result...
      Speaker: Andres Hurtado-Lorenzo, PhD
      Presented at: Precision Medicine Virtual Event Series 2018
      1
      MAY 10, 2018 | 10:30 AM
      C.E. CREDITS
      Strain Level Microbiome Profiling Using rRNA Gene Amplicons
      Strain Level Microbiome Profiling Using rRNA Gene Amplicons
      An ideal microbiome profiling method would produce strain level taxonomic classification of organisms and their relative quantities. We demonstrate proof of principle experiments that sequenc...
      Speaker: Mark Driscoll, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2018
      1
      MAY 10, 2018 | 6:00 AM
      Differential Abundance Analysis for Microbial Marker-Gene Surveys
      Differential Abundance Analysis for Microbial Marker-Gene Surveys
      We introduce a differential abundance analysis method for the analysis of sparse high-throughput data from large-scale surveys of marker genes for microbial communities. Our approach relies o...
      Speaker: Joseph Paulson, PhD
      Presented at: Genetics and Genomics Virtual Event Series 2018
      2
      APR 12, 2018 | 12:00 PM
      Standards for Mixed Pathogen Detection via Metagenomics
      Standards for Mixed Pathogen Detection via Metagenomics
      I will update the current state of our candidate RM 8376 for mixed microbial DNA detection via NGS-based sequencing and metagenomics. After community engagement to understand the metrological...
      Speaker: Jason Kralj, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2018
      1
      APR 12, 2018 | 9:00 AM
      Metabolites, Germs and People: Eavesdropping on Human Microbial Communities
      Metabolites, Germs and People: Eavesdropping on Human Microbial...
      The Whiteson lab uses culture-independent metagenomics, metabolomics, and ecological statistics along with hypothesis driven, reductionist microbiology to answer questions about how bacteria...
      Speaker: Katrine Whiteson, PhD
      Presented at: Molecular Diagnostics Virtual Event Series 2018
      1
      APR 04, 2018 | 8:00 AM
      Reducing Human Errors in Pharmaceutical Manufacturing QC
      Reducing Human Errors in Pharmaceutical Manufacturing QC
      A recent report by CPhI highlights the pharmaceutical industry drive to improve productivity by improving right first time quality and reducing overhead costs1. Another report indicates that...
      Speaker: Tony Harrison
      Sponsored By: Beckman Coulter Life Sciences
      7 3
      MAR 15, 2018 | 10:30 AM
      An Emerging Role of DNA Damage-Repair in Huntington's Disease
      An Emerging Role of DNA Damage-Repair in Huntington's Disease
      Machine learning approaches to pattern discovery in protein-protein interaction networks of Huntington’s disease brain and model organisms are revealing novel connections of the disease...
      Speaker: Animesh Ray, PhD
      Presented at: Neuroscience Virtual Event Series 2018
      2
    MAY 16, 2019 | 4:00 PM
    Towards Standardized Workflows - A focus on microbiome insights
    Towards Standardized Workflows - A focus on microbiome insights
    DATE: May 16, 2019TIME: 7:00am PDT, 10:00am EDT, 4:00pm CEST The emergence of NGS is revolutionizing the microbiological sciences and transforming medicine. Deep sequencing has...
    Speaker: Rita Colwell, PhD , Christiane Honisch, PhD
    Sponsored By: Eppendorf
    10 2
    MAY 09, 2019 | 12:00 PM
    A Metagenomic Assay to Interrogate the Role of Virome and Microbiome in Cancer
    A Metagenomic Assay to Interrogate the Role of Virome and Microbiome...
    Screening to identify all known viruses and other pathogenic microorganisms including bacteria, fungus and parasites in human tumor tissues will provide a more comprehensive understanding of...
    Speaker: Erle Robertson, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2019
    Sponsored By: Agilent
    3
    APR 25, 2019 | 9:00 AM
    Keynote Presentation: The Next Pandemic
    Keynote Presentation: The Next Pandemic
    “Emerging infections” are those that appear suddenly or are rapidly increasing in incidence or geographic range (e.g., HIV/AIDS, Ebola, SARS, Middle East Respiratory Syndrome [MER...
    Speaker: Stephen S. Morse, PhD, FAAM, F.A.C.E.
    Presented at: Infectious Disease Virtual Event Series 2019
    6
    APR 25, 2019 | 6:00 AM
    Long-Read Sequencing and Infectious Disease: New Insights Into Longstanding Challenges
    Long-Read Sequencing and Infectious Disease: New Insights Into...
    To reduce the global burden diseases causes by infectious disease, including parasites and bacteria, scientists need better information about mechanisms of virulence, immune evasion, and drug...
    Speaker: Meredith Ashby, PhD
    Presented at: Infectious Disease Virtual Event Series 2019
    Sponsored By: PacBio
    2
    APR 10, 2019 | 1:30 PM
    Laboratory Medicine Beyond The Box: Value Based Health Care & Diagnostic Evidence
    Laboratory Medicine Beyond The Box: Value Based Health Care &...
    Integration of technology is influencing practice in the clinical laboratory and treatment of patients in the clinical practice arena. As laboratories begin to move from a volume to value mod...
    Speaker: Elizabeth Marlowe, PhD, D(ABMM) , Joanna Sickler, MPH, MBA
    Presented at: Molecular Diagnostics Virtual Event Series 2019
    4
     
     
  • MAR 28, 2019 | 1:30 PM
    How Multiplexed Microarray Technology is Revolutionizing Microbial Testing in Cannabis
    How Multiplexed Microarray Technology is Revolutionizing Microbial...
    The world is filled with harmful pathogens that increasingly threaten the safety of our cannabis, food and beverages. And yet, testing labs still rely on the Petri dishes scientists invented...
    Speaker: Milan Patel
    Presented at: Cannabis Sciences Virtual Event Series 2019
    3
    MAR 05, 2019 | 9:00 AM
    Strategies to normalize miRNA expression in serum and plasma.
    Strategies to normalize miRNA expression in serum and plasma.
    DATE:  March 5, 2019TIME:  09:00am PST, 12:00pm EST MicroRNA(miRNA) are short non-coding single stranded RNA molecules that regulate gene expression at the post tran...
    Speaker: Emily Zeringer , Harita Veereshlingam, PhD
    Sponsored By: Thermo Fisher Scientific - Applied Biosystems
    7
    OCT 09, 2018 | 6:30 AM
    Good culture for your cells - Best practices for preventing contamination
    Good culture for your cells - Best practices for preventing contamination
    DATE:  October 9, 2018TIME:   06:30am PDT, 3:30pm CEST Are ethanol and antibiotics the best measures to prevent microbial contamination? Contamination is an ev...
    Speaker: Jessica Wagener, PhD
    Sponsored By: Eppendorf
    21 4
    SEP 18, 2018 | 7:00 AM
    Scaling end-to-end NGS solutions for clinical diagnostics in the cloud
    Scaling end-to-end NGS solutions for clinical diagnostics in the...
    DATE: September 18, 2018TIME:  07:00am PDT, 2:00pm GMT Next Generation Sequencing has become an essential tool in clinical diagnostic laboratories, however this technolo...
    Speaker: Joo Wook Ahn , Andrew Bond , Mattias Jansson , Alessandro Riccombeni, PhD
    Sponsored By: DNAnexus, QIAGEN
    6
    SEP 13, 2018 | 1:30 PM
    New PacBio Solutions for High-Resolution Microbiology & Immunology Analysis
    New PacBio Solutions for High-Resolution Microbiology & Immunology...
    PacBio Sequencing has been recognized as the gold standard in microbial sequencing due to simultaneously providing long sequence reads (genome contiguity), high consensus accuracy (genome acc...
    Speaker: Jonas Korlach, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: PacBio
    1
     
     
  • SEP 13, 2018 | 9:00 AM
    Viruses in Soils - What Do We Know, and Where Do We Go From Here?
    Viruses in Soils - What Do We Know, and Where Do We Go From Here?
    Viruses outnumber bacteria in soil by as much as 1000:1. However, there are few studies which examine the ways viral communities impact the soil microbiome, chemical cycles, and plants. Recen...
    Speaker: Laura Zinke, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    2
    SEP 13, 2018 | 9:00 AM
    Novel Solutions for Unbiased Results in Metagenomic Analysis of Human Microbiome Samples
    Novel Solutions for Unbiased Results in Metagenomic Analysis of...
    This two-part webinar will focus on novel techniques for obtaining unbiased results in 16S rRNA gene sequencing of challenging microbiome samples. Part 1 will feature QIAGEN’s solutions...
    Speaker: Matthew Fosbrink, PhD , Dominic O'Neil
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: QIAGEN
    1
    SEP 13, 2018 | 6:00 AM
    The Hurricane Microbiome Project: Environmental Exposures and Population Health
    The Hurricane Microbiome Project: Environmental Exposures and...
    The Alkek Center for Metagenomics and Microbiome Research (CMMR) at Baylor College of Medicine is pursuing numerous research and development efforts in the study of how the microbiome impacts...
    Speaker: Joseph Petrosino, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
    SEP 12, 2018 | 1:30 PM
    The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic Bacteria
    The NCTC 3000 Project: Mapping the Genetic Codes of 3000 Pathogenic...
    Reducing the impact of infectious diseases is becoming increasingly vital as the prevalence of antimicrobial resistance (AMR) continues to rise, threatening the effective prevention and treat...
    Speaker: Julie Russell, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
    SEP 12, 2018 | 12:00 PM
    Antimicrobial Resistance Identification, Strain Typing, and Assay Design with CLC Genomics Workbench
    Antimicrobial Resistance Identification, Strain Typing, and Assay...
    Whole genome sequencing of bacterial isolates via next-generation sequencing is becoming a standard approach for clinical microbiology and bio-surveillance labs seeking to conduct outbreak in...
    Speaker: Winnie Ridderberg, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    Sponsored By: QIAGEN
    3
     
     
  • SEP 12, 2018 | 12:00 PM
    Tracking Antibiotic Resistance Across Space and Time
    Tracking Antibiotic Resistance Across Space and Time
    Horizontal gene transfer (HGT) has long been recognized as an important source of genetic diversity. In the clinical setting, HGT plays an important role in the spread of antibiotic resistanc...
    Speaker: Sean Conlan, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    1
    SEP 12, 2018 | 6:00 AM
    Advancing Metagenomic Tools for Monitoring Antibiotic Resistance and Pathogen Gene Markers in Water and the Environment
    Advancing Metagenomic Tools for Monitoring Antibiotic Resistance...
    Next-generation DNA sequencing has opened new possibilities for microbial water quality monitoring, particularly for addressing emerging concerns like antibiotic resistance and opportunistic...
    Speaker: Amy Pruden, PhD
    Presented at: Microbiology & Immunology Virtual Event Series 2018
    3
    JUN 21, 2018 | 7:30 AM
    Keynote Presentation: Paving the Path Towards Precision Medicine in Inflammatory Bowel Diseases
    Keynote Presentation: Paving the Path Towards Precision Medicine...
    Crohn’s disease and ulcerative colitis also known as inflammatory bowel diseases or IBD, are characterized by chronic, recurrent inflammation of the gastrointestinal tract, which result...
    Speaker: Andres Hurtado-Lorenzo, PhD
    Presented at: Precision Medicine Virtual Event Series 2018
    1
    MAY 10, 2018 | 10:30 AM
    C.E. CREDITS
    Strain Level Microbiome Profiling Using rRNA Gene Amplicons
    Strain Level Microbiome Profiling Using rRNA Gene Amplicons
    An ideal microbiome profiling method would produce strain level taxonomic classification of organisms and their relative quantities. We demonstrate proof of principle experiments that sequenc...
    Speaker: Mark Driscoll, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2018
    1
    MAY 10, 2018 | 6:00 AM
    Differential Abundance Analysis for Microbial Marker-Gene Surveys
    Differential Abundance Analysis for Microbial Marker-Gene Surveys
    We introduce a differential abundance analysis method for the analysis of sparse high-throughput data from large-scale surveys of marker genes for microbial communities. Our approach relies o...
    Speaker: Joseph Paulson, PhD
    Presented at: Genetics and Genomics Virtual Event Series 2018
    2
     
     
  • APR 12, 2018 | 12:00 PM
    Standards for Mixed Pathogen Detection via Metagenomics
    Standards for Mixed Pathogen Detection via Metagenomics
    I will update the current state of our candidate RM 8376 for mixed microbial DNA detection via NGS-based sequencing and metagenomics. After community engagement to understand the metrological...
    Speaker: Jason Kralj, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2018
    1
    APR 12, 2018 | 9:00 AM
    Metabolites, Germs and People: Eavesdropping on Human Microbial Communities
    Metabolites, Germs and People: Eavesdropping on Human Microbial...
    The Whiteson lab uses culture-independent metagenomics, metabolomics, and ecological statistics along with hypothesis driven, reductionist microbiology to answer questions about how bacteria...
    Speaker: Katrine Whiteson, PhD
    Presented at: Molecular Diagnostics Virtual Event Series 2018
    1
    APR 04, 2018 | 8:00 AM
    Reducing Human Errors in Pharmaceutical Manufacturing QC
    Reducing Human Errors in Pharmaceutical Manufacturing QC
    A recent report by CPhI highlights the pharmaceutical industry drive to improve productivity by improving right first time quality and reducing overhead costs1. Another report indicates that...
    Speaker: Tony Harrison
    Sponsored By: Beckman Coulter Life Sciences
    7 3
    MAR 15, 2018 | 10:30 AM
    An Emerging Role of DNA Damage-Repair in Huntington's Disease
    An Emerging Role of DNA Damage-Repair in Huntington's Disease
    Machine learning approaches to pattern discovery in protein-protein interaction networks of Huntington’s disease brain and model organisms are revealing novel connections of the disease...
    Speaker: Animesh Ray, PhD
    Presented at: Neuroscience Virtual Event Series 2018
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